EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM139-12691

Organism

Mus musculus

Tissue/cell

Rib_chondrocyte_P1

Coordinate

chrX:7247630-7248260

Target genes

Number: 13
Name	Ensembl ID

Usp27x	ENSMUSG00000046269
Foxp3	ENSMUSG00000039521
Ppp1r3f	ENSMUSG00000039556
Ccdc22	ENSMUSG00000031143
Syp	ENSMUSG00000031144
Prickle3	ENSMUSG00000031145
Plp2	ENSMUSG00000031146
Magix	ENSMUSG00000031147
Gm6079	ENSMUSG00000081083
Gpkow	ENSMUSG00000031148
Wdr45	ENSMUSG00000039382
Tfe3	ENSMUSG00000000134
Pim2	ENSMUSG00000031155

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf12	MA0742.1	chrX:7247929-7247944	GGCCACGCCCTGCCA	+	6
MNT	MA0825.1	chrX:7248175-7248185	ACCACGTGCC	+	6.02
ZNF263	MA0528.1	chrX:7247643-7247664	TGGGAAGGGGGGGGGGGGAGA	+	6.17

Enhancer Sequence

CAGGCAACCC CTTTGGGAAG GGGGGGGGGG GAGACTGACA CTAGAAGGGC AGGGCTCCGT 60
TAAAGGAACC GCACCTCTTT TATGAGTGAC CCAAAGGCGG TGCCCACTTG GAGGGGGATG 120
GAAAAACCAA GGTTCCCTAT AACCATCCAA AGAGCAAAGG ACCTCCCATC CAGTCCCAAA 180
TGGGCAAGGA AGAACTGGCG AAGTGTGGAA CGCCCTACCC TAGAGGGGAC TAGCTCTACC 240
CCACCCCAAC AGGCCCCGCC TTTAGGCGCA CTGCCAGCCC GCCAGCTAGT GCCCAGGCCG 300
GCCACGCCCT GCCACGAGAG GCTCCCACTC CCCAGGACCC CTTCTCTCCG ACCACTATGA 360
ACCTACACCC ACACACGCAC CCACACATCC CCAGCCCCCA ACATTAGTTA TAGATAACTC 420
ACCTCACCAG TGAACCACCA GCTCTCCACC CCTTCGCCCA TGCCCCACCG AACGCCCTGC 480
ATCTTGGCTG GCTTCGACCC TCCTCCACAA ACTCACCCAC CTGCATCCCA CTGGCAAGCA 540
GCTGGACCAC GTGCCTGCCT CAACCGCCAC AGTCCCGTAC CCAGTGGTCC AGCCTGCACA 600
CTCAGCCTCT ACCCAACCTC CGGCCGGGGA 630