EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM139-11302

Organism

Mus musculus

Tissue/cell

Rib_chondrocyte_P1

Coordinate

chr8:4087180-4087820

Target genes

Number: 9
Name	Ensembl ID

Cd209c	ENSMUSG00000040165
Cd209f	ENSMUSG00000051906
Evi5l	ENSMUSG00000011832
BC068157	ENSMUSG00000064125
Map2k7	ENSMUSG00000002948
Gm14378	ENSMUSG00000089736
Ctxn1	ENSMUSG00000048644
Timm44	ENSMUSG00000002949
Elavl1	ENSMUSG00000040028

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr8:4087441-4087455	TTGGGGGCGTGGCC	-	6.3
KLF16	MA0741.1	chr8:4087443-4087454	GGGGGCGTGGC	-	6.62
SP1	MA0079.4	chr8:4087442-4087457	TGGGGGCGTGGCCTC	-	7.03
SP3	MA0746.2	chr8:4087442-4087455	TGGGGGCGTGGCC	-	6.57
SP4	MA0685.1	chr8:4087440-4087457	TTTGGGGGCGTGGCCTC	-	6.72
SP8	MA0747.1	chr8:4087442-4087454	TGGGGGCGTGGC	-	6.11

Enhancer Sequence

CCAGAAAATC AAATAACCCC ATTAAAAAAT GGGGCTCAGG AGACCGCACC ATCTGCGGAG 60
GCGGCCAAGC GTGTCTCTGA GGGGCGAGCC CCGTTGGTTC TCTCCTTCTC CCTACCCTCT 120
CTAAACTTCG TCTGCTCTTA CCTCTCGAGC TTCTGTCTGG GCCCTAGAGA TGTAGCCTGG 180
GGTCCCCAAA CCAAGGCCGA ATGCCACTGT AGCTATGGCG CCCCGAGGAT TGGGGCGGTC 240
TCAACCTAAC TGGGGCGTGT TTTGGGGGCG TGGCCTCGGC AGGGCGGCTG CCTTGGAGCT 300
GCAAAGTTTG GCTGTGGCGG CAAATGGGTT TGGGCGGCTC CTCGGCGGGT GGCGGTGGTG 360
GCCTTAGCGG TTCCTCCTGG CCCTGTTAAT GTCAGGGCCA AGCCCGGGGA GGATGGCGCC 420
TTAGAGCCTG GCCTTGCTGG GGTAGGGGCG GGAGGGGGGC CGGGGCGGGG ACCGGCCATG 480
TCGGAGGTGA CCTGGAGTCT GCTGCAGCGC TGGGGCGCCA GTCTTAGGAG AGGCGCCGAC 540
TTCGACTCTT GGGGCCAGCT GTTGGAGGCG ATAGACGAGT ATCAGATATT AGCAAGACAC 600
TTACAGAAGG AGGCCCAAGC TCAACACAAT AATTCTGAAT 640