EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM139-09653

Organism

Mus musculus

Tissue/cell

Rib_chondrocyte_P1

Coordinate

chr5:135936340-135936960

Target genes

Number: 9
Name	Ensembl ID

Fzd9	ENSMUSG00000049551
Nsun5	ENSMUSG00000000916
Pom121	ENSMUSG00000053293
Hip1	ENSMUSG00000039959
Ccl24	ENSMUSG00000004814
Rhbdd2	ENSMUSG00000039917
Por	ENSMUSG00000005514
Gm16061	ENSMUSG00000080972
Tmem120a	ENSMUSG00000039886

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXH1	MA0479.1	chr5:135936902-135936913	CCCAATCCACA	+	6.14
REST	MA0138.2	chr5:135936835-135936856	TGCGCTGTCCCAGGACCTGAT	-	6.2
ZNF263	MA0528.1	chr5:135936355-135936376	GGGGGAGGGGAAAGAGGATGA	+	7.04

Enhancer Sequence

CTGCAAAAAC AAGATGGGGG AGGGGAAAGA GGATGAAATA AATAAGCCTC TGAGAGCTAC 60
TGAGACCCTC CCCTTCCCGC CTCCCCAACA CCCCACTCCT CCAATGACCC TTGGTATTGC 120
CAGGGGCCAA GAGAACATCG GGGCTCCAGA TCCTCTTGAG TACCCAGGTT AGGGGACAGG 180
GCGCAGAGGT GGGCAGCACT CCCAGACCAG CTGTCCCAAG CTGTCCCAAG GGAGCAGGCT 240
TTGCTGCCTG GCATTGGCTG TGCCCAGCTG CTGTACCCGC CTGCTGCTCC GCTGGCTTGG 300
CACAACAGCG TGGTAATTAA GGGGCCACAC AAAGGAAAGG CTTCTTTACC CCCGGGGAAA 360
CATTATTCCT CAGAATGCAA GAGGAAGAGA CGCTGATGTC AGGGGGGCCA CTGCAGCCTG 420
AGCCCCAGTC AACCACCCCT CTGCCACTTC TAAACCCTTC CCACGTGGGG CTGGCGAGAT 480
GGATCTGCAA GTAAATGCGC TGTCCCAGGA CCTGATGAAG AAGTGCCCTT CCCAGGACCC 540
CCATGAAGAT GGCATGGGAC AGCCCAATCC ACAAAAATGT CCCCTGATCT TCATAAACAA 600
AACTCCCACA GGGTTTCTCT 620