EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM139-07843

Organism

Mus musculus

Tissue/cell

Rib_chondrocyte_P1

Coordinate

chr3:89883220-89883440

Target genes

Number: 11
Name	Ensembl ID

Atp8b2	ENSMUSG00000060671
Hax1	ENSMUSG00000027944
4933434E20Rik	ENSMUSG00000027942
Ubap2l	ENSMUSG00000042520
Tpm3	ENSMUSG00000027940
Rps27	ENSMUSG00000090733
Rab13	ENSMUSG00000027935
Jtb	ENSMUSG00000027937
Slc39a1	ENSMUSG00000052310
Crtc2	ENSMUSG00000027936
Dennd4b	ENSMUSG00000042404

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr3:89883373-89883388	CAAACCCCGCCCCCT	+	6.49
SP2	MA0516.2	chr3:89883372-89883389	CCAAACCCCGCCCCCTT	+	7.08
SP4	MA0685.1	chr3:89883373-89883390	CAAACCCCGCCCCCTTT	+	7.15

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07586

chr3:89882713-89888321

Intestine

Enhancer Sequence

GCAGTGGTAG GGAGGCACCG GATAAGAGAG GGGTCAACTG CGTAAGTGTT CACGACAGCA 60
CCATTTTAGT AAATGGGACA GCCATTGTTA CGAGACAGCC TGGTGGGTGA GGCTAGACTA 120
TGAAGCGCCT CTCAGTTACT ATGGTAGCCT TACCAAACCC CGCCCCCTTT ACTGGACTAA 180
GGAAAGACGG CCCTGAGTGG TCGCCTAGGG TTACTGGGAG 220