EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM139-07781

Organism

Mus musculus

Tissue/cell

Rib_chondrocyte_P1

Coordinate

chr3:87723620-87724070

Target genes

Number: 10
Name	Ensembl ID

Pear1	ENSMUSG00000028073
Prcc	ENSMUSG00000004895
Hdgf	ENSMUSG00000004897
Isg20l2	ENSMUSG00000048039
Rrnad1	ENSMUSG00000004896
Crabp2	ENSMUSG00000004885
Nes	ENSMUSG00000004891
Bcan	ENSMUSG00000004892
Gpatch4	ENSMUSG00000028069
Iqgap3	ENSMUSG00000028068

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr3:87723933-87723953	CCCCCCCACACACACACACA	+	6.17
RREB1	MA0073.1	chr3:87723931-87723951	CCCCCCCCCACACACACACA	+	6.38
ZNF740	MA0753.2	chr3:87723929-87723942	CCCCCCCCCCCAC	+	6.92

Enhancer Sequence

CGGGGAGGTG AGGCTACTCA GCGACGGGGA AGGTCGGAAG GTGGATAAGC GAAGGGACTT 60
CTTTTCCTAG TTTTAAACTG AGCCTTGGGC TCCTCTTTTG CTAGGACGTT GGAGCTATCC 120
GCATATCGGG GTGAGTCTGA CGAGGGAATT ACTTGAGGCG GTGACCTGAG GACTTGTACT 180
GAGAAGAAAG CCAGCCCCAC CACGGAAGTG ACACTAGCTA GCATCTAGGT TGTGTAGGGA 240
ACCAAAGGGA AAGATGGAGT GGGGGCCTGT CCGGGGCCTA AAGGAGTTTT TAAAACAAAC 300
AAGCAAGACC CCCCCCCCCC ACACACACAC ACATACACAC TTGTGATGCT GCATGCTAAG 360
AGAGGGCAAG GTTTTCCTGG ATCTTGCTGT TAGCATCCCT TACTGAGTTC TCAGTTTTCG 420
ACTTGTCAGG TAGTAGTTAG TGCTTAGTAA 450