EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM139-06454

Organism

Mus musculus

Tissue/cell

Rib_chondrocyte_P1

Coordinate

chr19:53675040-53675500

Target genes

Number: 8
Name	Ensembl ID

Smndc1	ENSMUSG00000025024
Dusp5	ENSMUSG00000034765
Nutf2	ENSMUSG00000071497
Smc3	ENSMUSG00000024974
Rbm20	ENSMUSG00000043639
Pdcd4	ENSMUSG00000024975
Shoc2	ENSMUSG00000024976
Bbip1	ENSMUSG00000084957

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TFAP2B(var.2)	MA0812.1	chr19:53675370-53675381	TGCCTCAGGCT	-	6.14
TFAP2C(var.2)	MA0814.1	chr19:53675370-53675381	TGCCTCAGGCT	-	6.32

Enhancer Sequence

GCAGGTAAGG GCCGTGAGAG GCGGCGGGGT GTCCCGGAGC GCGCCGCGGG TGGGTTAGGG 60
CCGGCCTGGG CTTGGGGGGG CGGGGAGGAG CGGGGCCCTG ACGAGCCGAG CGCCGGGCTG 120
CAGTCGGCGC TTTCCCCCGG GGCGCGGTGC GTGGAGCCGA GCGGAGCCGA GCGGGACCGG 180
GCGCGGCGGG CTGCAGGCGG AGGCCCGGCT TCCTCGGGCG CCGCGGGCTG CTGCGAGCTG 240
CTGGGAGGCC GCGTCGTTCT GCAGGCAGGC ATGGCGGTGC ATGGACCGCC TTCGCGAGGC 300
CCCGGGCTGG GCTGCAGGCT CTCTCCGCCT TGCCTCAGGC TTTGCCCCAG CAGGGCGGAC 360
CCTCGCAGCA GGTCGCGTCG CGCCTGCTCA CTCGGTTGTT TACTTCTGTC AAAATGCTCT 420
TCCCGCGCGC GAGCGCCGAG CCCCCGGGAC ACGCGCTGGG 460