EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM139-00589

Organism

Mus musculus

Tissue/cell

Rib_chondrocyte_P1

Coordinate

chr1:159409940-159411990

Target genes

Number: 2
Name	Ensembl ID

Gm6058	ENSMUSG00000087632
2810025M15Rik	ENSMUSG00000049881

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata4	MA0482.1	chr1:159410930-159410941	TCTTATCTCTT	+	6.02
MNX1	MA0707.1	chr1:159410589-159410599	TTTAATTACC	-	6.02
NFE2L1	MA0089.2	chr1:159410435-159410450	GCATGACTCAGCAGG	+	6.75
Nfe2l2	MA0150.2	chr1:159410433-159410448	AGGCATGACTCAGCA	+	7.3
ZNF263	MA0528.1	chr1:159411584-159411605	ACCTCCACTCTTTCCTCCTTC	-	6.65

Enhancer Sequence

TGAGTATAAC TTATATTTCC CTAATGATCA GTGACCTTGA GTCTTTTCAT GAATTTATAT 60
GAGGTCTGCA TCTCTTTTTT GATGAAATAT AATGATGATT AATCTTTTTT TTTTTGTGAT 120
ACCATGCCAT GGGACTTGAA CCTGGGACTT CTCACATGTT AGGAAATGCA CCCTTCCACT 180
GAGCTGTATC TCTGTCGTTG ATTGACTTTT AAAAGAGGGT TCAGATCAGT TTGTATCAGC 240
ATAAGGGCAT GATGAATGTA ATTCAGCAGT GTCATCAGCC AAAACATTTC ACCTTTTAAT 300
GGAAAGTCCC ACTCAGCCTC AGGTACATTC ATTGGCTTAT TCACGAGTTT GTTTTATTCA 360
TCATTTGCTG AGAACATTCT GTATGACAGT TGATAAAATT TATGTAGGAC GAAGTCCTGC 420
CCTTGAGTTT ATTTTTCAGT CGGAAAGACC TCAGGAGGGC GCCGCCAATA GGGAAGAGCC 480
GAGTGCTGAC AGGAGGCATG ACTCAGCAGG ATATATCTGG GGAACCTAAG TACTCTGATT 540
ATTCCGACTT GATGAGCTGA TTAAAAATTC CACAAGCAGA ACCTTCACCT TAAAACAAAA 600
GCATTATCTT TCCCTTCCTC AAATTCCAGG TTTCGAGTCT CTCCAGACAT TTAATTACCG 660
CTTCACCCCC TCAAGGCAGA GAACCAATGT TCTGGGTACG GTTTGCATCT TGACTTCAGT 720
AGTTGCAGCT CCCTGTCTGC AGCAGCCTGT AGGATGCAGG GCAGTGTCCT CAGACCTCTG 780
TAGCAGCCCT CAAAAGATAG GTTTGCAGCT TTGCATTTTC CCACACAGAC TCTCTCTTCA 840
TTGCCTTCAT TTCCCTTTCC CAGACGCCAG TGGGAAGCTG GTTCCCAGCT CTGGACAGAA 900
ACCTAGGAGC AATGACAATT ATAACAGAAG TGGCAACTGG ACATGGGAAG CCATGGGACG 960
TCTGAAAAAC AGATTAAGCT TTCCACATAG TCTTATCTCT TTAGCAAGCT AGGTAAATAC 1020
GGGACTCATT TCTACAGAGG ATTTATTTAT ATGCAAAATG GCTAAAAACA AGTTTGCACT 1080
TGAAGCCACA GTTTTCTTAT ATGTTAACAT TCATTTGCAG GGAGTCTTCA TTTCCCTGGG 1140
ATGCCAGGTG ATGAAACACC ACTATCTCAG ATAATACTTA TTTTCTTAAC TGCTTTCTAC 1200
TGTGAGGCTC TGACAAATCT AGGGGAGTGA GCAGCAATAC CTGACAGGGA GAGCCGTGCA 1260
GCTGTGAGTC ACCTGGAGAC AGCTTTGGGG AATGAGTGTT CCTAACATCT GTCTTAGACT 1320
TCCTACGCCT CCTCCCAGTG AGCCTGTCTG TACTGTGGAA AGGTCTCCTA AGGCACAAAG 1380
CCCCACAGTG CAGATGTTTT TGAAAACAGA GATTTTTATG CTACTCAGAG AGCGACATGA 1440
TTGATTGATT TCTCTACTTA TTTTTAGTTA CTTATTTTGT GTGTGCTTTT TTTGGGGGCA 1500
GGGGGAATCT CAAATGGGAA GTGTTGTTTA ACCAGCAAAC TCTTCTCAAA GCATATATTC 1560
CTTGTTGGAC TATGCAAGGC TAATCTTCTG CTGTTATATC CATATACTTA TACATGTTTA 1620
CCTTTTCTTG TCCCATGTAC TTTTACCTCC ACTCTTTCCT CCTTCCAAGC ACCTCTCTGC 1680
AGCATGTCTG ATGTATTCCT GTGGGTTTGT GTTTCCTTGT GAAACACACA GCCGTATTTG 1740
TGTGTTATCT TTAACATCTG CAGCTGGTGG TGTGCTCTTG ATCTGAGTCT GCTTCTTACC 1800
TTCAGATGCC ATGCTGTTGT AAGACTTCCA TTTTGCCACC AGCACTTCTG TGCGTCCTGC 1860
ATTGTCTCCC AGAATTGTGC AGTGGTACTC ACATAGTGTA CACCCACCAT GGTTTGCAGA 1920
CACACTCACG ATAGACCTCC AGGTTGAGTT CATGACACCA TACTCGGTGT GATAATAGGC 1980
AGCCTTGTGG GTCTAAACTT AGGGACTTGT GTAGCTGTCT TGTGGGGACT GTTCTAGGAG 2040
CAGGACTGCT 2050