EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM139-00165

Organism

Mus musculus

Tissue/cell

Rib_chondrocyte_P1

Coordinate

chr1:55083470-55084180

Target genes

Number: 9
Name	Ensembl ID

Sf3b1	ENSMUSG00000025982
Coq10b	ENSMUSG00000025981
Hspe1	ENSMUSG00000073676
Hspd1	ENSMUSG00000025980
Gm16581	ENSMUSG00000089670
Mob4	ENSMUSG00000025979
Gm6822	ENSMUSG00000061863
Rftn2	ENSMUSG00000025978
Mars2	ENSMUSG00000046994

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr1:55083580-55083601	CCTTTCCTTCTCTCTTCCTCC	-	6.42
Zfx	MA0146.2	chr1:55084059-55084073	CAGGCCTCGCCGCG	-	6.35

Enhancer Sequence

ACTTTCCTTA TGGAATCTGG TTGCTTCTCA ACATGTTTCT AGCTCTGTTT ACTCTTGTGC 60
AGCATAAAAT AAGCGACTAC CCAGAAAACT TTGGCAACTG GTCAAATCTG CCTTTCCTTC 120
TCTCTTCCTC CTGATTCTCC AACACCTAGC TCTCAAAGGG AAAAAGATAG AACACCAGGA 180
CACAAGTGAT TAAAGGAGTA AACTACCAGA TTTTCTGCCG GAATCATTTA GTGCAAGCAC 240
CACAACACGA TCCAGCCGCC TTGGAGATGC CTGTATCGCG AAGGCTGGGA TTGGCAGGCC 300
TGCGCTGAAG CGGCCTCCGT TAGGAGCGGC CCGAAAGCGG CTGCCGTCAT TCAGGGCTTT 360
CCAGGTACGA ACTGCCGACG ATAGCGCCCG GGGGGCGAGA AAGTCGGCCT CCCACGTCCG 420
CCTCCCCGCT CCCTCCCCGG GAGTCCCCCG GGGCAAGCCG CTCGAGCGAG GCTCTCCGGT 480
CAGAACAAGA GAACTCGGAA GCACCAACAG CCAGCGCGGA ACAAAGCGCC GGTCCCGGAG 540
TGCGAGAGGA CGCCATTACG CGGGCAGCGG CCTGCGCCGA CGAGCCGAGC AGGCCTCGCC 600
GCGCGGCCTC GGTCGAGACC AGAGATGCCA CGCGAAGACG CAGAAAGCCA GGAGAGAGGG 660
CCGCGGCTGG CTGGCTGCCG AGGTCGCGCG TGGGAAGGGA AAGGCCGCTT 710