EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM139-00130

Organism

Mus musculus

Tissue/cell

Rib_chondrocyte_P1

Coordinate

chr1:42740910-42741960

Target genes

Number: 3
Name	Ensembl ID

Pou3f3	ENSMUSG00000045515
Mrps9	ENSMUSG00000060679
Gpr45	ENSMUSG00000041907

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr1:42741809-42741828	CCGCCTGCAGAGGGCGCCC	+	6.29
ZNF740	MA0753.2	chr1:42741673-42741686	GGGGGGGGGGCGG	-	6.64

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_04414

chr1:42740670-42752312

E14.5_Brain

Enhancer Sequence

CAAAAACCTT TTAGTCACAG TCCTTAAGAC CAAGGCGAGA GAAAACCTCT CCTCAACTCC 60
CTAAAACGTG GCTTCTGAGT GCATGGGCCC TAGGCTAAAG CAAGACCAAG CTGTAAGATG 120
CTGTCTGTTA GCTAGTATTG TCCCTCTAGG CTTTACTTTG GCTCACGTGG AGCCGGCTGT 180
CCATAACAAC CCCGGACCAC GGACCACGAG GGACCACAAG GGAGATCTCT GAGGATCTGC 240
AGAGATGACC TAACCGAAAG AGGGAGATGT ACAGTGGATA GGAAACAAGC CTGGGGCAGA 300
CAGAGGACTC AAAGCTCTGC ACTATAGGTA CCCACACTGG TGGAAAACGA CTAGCATTGA 360
GCATCCTGCT GCGCCTCCTG TCCTGCCTTT CCAAGCCCTG CCCTGGCCTG CCCTGCCCCG 420
CGCTGCCCTG CGCGCGCGCG CCTCACTCAC ACGCACACGC CTTAGCACAC GCACACACGT 480
GCTCATGCAC ACTACTCCCA GCAGTGTCTC TGTCCAGGCT CTGGGGCGAC GTCCGCCTTT 540
AAGGGGCGAC AGCCCTGTCC TTCATGGAGC AGCCCCGCAA GGGAGCAGAG AGGCACGGCG 600
GGCTCTGGAG CGCGTGGGCC GCGACCGAAG AAGCACGAAG GGCAGGTGGC TGAAGGGGGT 660
TTTCAGTGGA GGGCGTGCAG CGGCGGGAGG GGACAGCAAG GATCTGGGGG TGGGGGTGCA 720
TTCTTGGTTG CTCTTTCCCG CAGCTGCAGA GAACTTGCCT TGGGGGGGGG GGGCGGCACT 780
AAGTGCCTAG TCGCACAGCC TGGGTTGGGG CTGTGAGTGA GCGAATGGGA GAACCTGGCT 840
GGCACGCGGG CAGTTGAGGT ACCCAACACG CTGGACACAA GCGCGAGCCC TCTCCGAGTC 900
CGCCTGCAGA GGGCGCCCTC ACGGAGGCGC CCTCGGGACT GGCCCGCCAT CCCCAGAGCA 960
CTAGGGCTAG CTCCTTCCGG AGGGGTCGGG ATGGTATGGT CACATTGGTC ACCATCTAAG 1020
AGACCTCGCA AGTGCGCAAT CCTTTTGCTT 1050