EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM139-00109

Organism

Mus musculus

Tissue/cell

Rib_chondrocyte_P1

Coordinate

chr1:38297440-38299100

Target genes

Number: 6
Name	Ensembl ID

Lipt1	ENSMUSG00000037216
Mitd1	ENSMUSG00000026088
Mrpl30	ENSMUSG00000026087
Txndc9	ENSMUSG00000058407
Eif5b	ENSMUSG00000026083
Rev1	ENSMUSG00000026082

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR2	MA0258.2	chr1:38298777-38298792	AGGTCAGGCTGTCCC	+	6.38
NR2C2	MA0504.1	chr1:38297959-38297974	GGAGGTCAGAGGTAA	+	6.06
ZBTB18	MA0698.1	chr1:38298627-38298640	AAACATCTGGAAT	-	6.36

Enhancer Sequence

TCGTCATCTT CTACTTTAAG CTTAGAGCAT GGGAAGATAG CTGACATTCC TGCACCTGCT 60
TGCTTGGATG TAACAAGGCT AGGAGAGGCA CGTTGTACCA CATAAATCTC CAGCTGACTA 120
TATCTTCTGG GGCAGAGAAT GGAGCAGCCC TCGTCCCCGT GTGAAGCACC CAGGCATGTG 180
TTGTGTGTGA TTCAAGGAGA GCTGAAATAT GCATTGTTTT AAGAGATTAA GTAGGGTGGA 240
GAGGAACCCG AACCCCGGGC AACCAGCCTG TGGTGAGGCA GACCTTCCCA GTCCAGGGCC 300
ACATATCCCC TGCAAACTGT GGACCCAGTA GGCACCACCC CTTTCTGTGT CCATTAACTT 360
TGGGTGGCAA GTGACTCAAC AATTTGAAGC TTCAGTTTCC CATATGCAAG ATTTGGACAC 420
TAATGCATGC CGCAGAAGGC TGTCTGTTGA TGACATGGCA TGGTGACAGG AAGGTGCCCA 480
CGCATAGGCC CTGAGACATT CAGCCAGTAT GGCCCCCCAG GAGGTCAGAG GTAACCTACC 540
ATCCAGAGAG GGAGAGTTAA CAATGTGCTT TGTGCCCATC TTTTCTTGCA CACAGGAACT 600
CGTGTCCTTT CACAATTACA TAAAATAGCT AGGACAGTGA CTCAAAGAAA ACCTGGCGCT 660
CCTTCGTATG CTCTCTCCAG TGACTAACAC CTCAATTTGC AGTGCTCATG GAGTGGTGTT 720
ATTTGCCTTG GCTCCTCTTA GGTCTAGGAT CAGGCAAGCT GAACAGGGGA GACTTGTCTC 780
CATTGAAAGA TGAAGAGCTG TGACCTCAAG TGGCTCGCTG ACTCCCTGGC TGTGAACAGG 840
GGGAACAAAG CCAAGAAGAG GCAGTGTTGG GGAGCGGCAG GGTCTCCGAC TCAGCCCAGG 900
CAGGTCTTCA GAAAGCACTA TTTGATTTGC TACACCAGGG CCAGCAAGCA GGCTGACCTG 960
GCCTGTGATA TTTAACAGGG GCCATGGCCT TGGTTAAGCA AGCCTGTTTC AACGTTTTAG 1020
CTGAACTGAC TACAGTGAGC ACAGTCACAC TGGATTGATT CCCTCTCTCA CGATGAGAGG 1080
GATAAAGAGC AGAATACTAT GCAAAAGAAG ACAGAATAAT TGTAGTGAGT CCAAGGGGCA 1140
AGGCCGAGAA ATGTACTTGG AATTTGGTAG ATCAGATGGT TGTTCTAAAA CATCTGGAAT 1200
ATACTCTGCG TGGTGTATCC TGAAGGGACA TATGCTGCCC AGAGACTGTA TGTTGCTTGC 1260
CAGGGTGAGG ACATGATGTG GCTGCCAGAC ACTGGCCTAA GAACCAGCAC AGGGCAGGGA 1320
GCTGGGCAAA GTGAGAAAGG TCAGGCTGTC CCAGCCATCG GGAGCACATT AACCTTCCCT 1380
GGCAGCAGGG CACTGTAGTG GCTCCAAATC ACAGTCATCA AAGGCTAGCT AGCTAGTGCA 1440
AACAGCCAGC GCTCGGCCAA GGCTGTCTCA GCAAAGGATG AAAAAGAGCA GGTCCTTGGG 1500
AGGGGAGGAC TTGGACAGGG GCAGGCCCTG AGTTCAGAGT AGCAGCTGGC TGGACAGTCA 1560
GGTCTCATGG CTGTGTGATT TTCAAGTTCA GAGAGACACT TGGCCAAAGG ACAGTTCTGG 1620
AGAAGGTCCT GTGTGCCAGG CCAGTAAAGC CAGAGAAGAA 1660