| EWSR1-FLI1 | MA0149.1 | chr12:100171606-100171624 | GGGAGGAAGGAAAGAGGC | + | 6.05 |
| Foxd3 | MA0041.1 | chr12:100169511-100169523 | GTTTGTTTGTTT | + | 6.32 |
| Foxd3 | MA0041.1 | chr12:100169515-100169527 | GTTTGTTTGTTT | + | 6.32 |
| GCM2 | MA0767.1 | chr12:100175010-100175020 | TATGCGGGTA | + | 6.02 |
| Klf1 | MA0493.1 | chr12:100175190-100175201 | AGCCACACCCA | + | 6.14 |
| LMX1B | MA0703.2 | chr12:100172593-100172604 | TTAATTAAAAT | - | 6.62 |
| Nr2f6(var.2) | MA0728.1 | chr12:100171388-100171403 | TGACCTCCTAACCTT | - | 6.14 |
| Nr5a2 | MA0505.1 | chr12:100174101-100174116 | GAGTTCAAGGCCAGC | + | 8.25 |
| POU6F2 | MA0793.1 | chr12:100170146-100170156 | ATAATGAGCT | - | 6.02 |
| RREB1 | MA0073.1 | chr12:100174206-100174226 | ACCCAAAACAACAACAACAA | + | 6.72 |
| RREB1 | MA0073.1 | chr12:100172256-100172276 | CCCCAAACTACCCCCAAAGC | + | 7.11 |
| STAT1 | MA0137.3 | chr12:100169350-100169361 | TTTCCTGGAAA | - | 6.62 |
| Sox3 | MA0514.1 | chr12:100170379-100170389 | CCTTTGTTTT | + | 6.02 |
| ZNF740 | MA0753.2 | chr12:100169253-100169266 | CCACCCCCCCCCC | + | 6.44 |
