EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
MM138-03028 
Organism
Mus musculus 
Tissue/cell
Retina_neonate 
Coordinate
chr12:88163500-88168390 
TF binding sites/motifs
Number: 31             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr12:88167801-88167819CCAGCCTTCTTCCCTTCC-6.04
EsrrgMA0643.1chr12:88164426-88164436ATGACCTTGA-6.02
Foxj3MA0851.1chr12:88166451-88166468AGACAGTAAACAAACAC+6.88
IRF1MA0050.2chr12:88163606-88163627TCTTTCTTTCTTTTTTTTTTT+6.25
IRF1MA0050.2chr12:88166339-88166360TTTTTGTTTCTTTTTTTCTTT+6.45
KLF14MA0740.1chr12:88166135-88166149AGGTGGGCGTGGCT-6.71
KLF5MA0599.1chr12:88166020-88166030GCCCCGCCCC+6.02
Klf1MA0493.1chr12:88167793-88167804GGCCACACCCA+6.62
Nr5a2MA0505.1chr12:88164425-88164440GATGACCTTGATCTT-6.34
Nr5a2MA0505.1chr12:88163692-88163707GCTGGCCTTGAACTC-8.25
RARAMA0729.1chr12:88166879-88166897CCTTGAACTTCTGACCTG-6.66
RFX1MA0509.2chr12:88164967-88164983GGTCGCCATGGAAACC+6.14
RFX1MA0509.2chr12:88164967-88164983GGTCGCCATGGAAACC-6.16
RFX2MA0600.2chr12:88164967-88164983GGTCGCCATGGAAACC+6.47
RFX2MA0600.2chr12:88164967-88164983GGTCGCCATGGAAACC-6.57
RFX3MA0798.1chr12:88167953-88167969GGTTCCCATGGCAATG-6.09
RFX3MA0798.1chr12:88164967-88164983GGTCGCCATGGAAACC-6.74
RFX3MA0798.1chr12:88164967-88164983GGTCGCCATGGAAACC+6.83
RFX4MA0799.1chr12:88164967-88164983GGTCGCCATGGAAACC+6.32
RFX4MA0799.1chr12:88164967-88164983GGTCGCCATGGAAACC-6.4
RFX5MA0510.2chr12:88164967-88164983GGTCGCCATGGAAACC+6.15
RFX5MA0510.2chr12:88164967-88164983GGTCGCCATGGAAACC-6.25
RORAMA0071.1chr12:88164427-88164437TGACCTTGAT-6.02
RREB1MA0073.1chr12:88163503-88163523CAACCCCCCACCCCCACCCC+6.29
RarbMA0857.1chr12:88166882-88166898TGAACTTCTGACCTGT-6.1
SP1MA0079.4chr12:88166136-88166151GGTGGGCGTGGCTGC-6.18
SP3MA0746.2chr12:88166136-88166149GGTGGGCGTGGCT-6.78
SP4MA0685.1chr12:88166134-88166151CAGGTGGGCGTGGCTGC-6.04
SP8MA0747.1chr12:88166136-88166148GGTGGGCGTGGC-6.62
STAT3MA0144.2chr12:88166168-88166179CTTCTGGGAAG+6.14
ZNF263MA0528.1chr12:88165140-88165161TCTTCCCCTCTCGGCTCCTCC-6.44
Number of super-enhancer constituents: 20             
IDCoordinateTissue/cell
mSE_00507chr12:88151708-88178129pro-B_Cells
mSE_01277chr12:88127683-88178050Th_Cells
mSE_03417chr12:88164203-88166892Bone_Marrow
mSE_03860chr12:88164404-88166265Cerebellum
mSE_04026chr12:88164202-88166496Cortex
mSE_04392chr12:88163769-88166991E14.5_Brain
mSE_04811chr12:88164104-88167005E14.5_Heart
mSE_04811chr12:88167132-88168689E14.5_Heart
mSE_05545chr12:88164078-88167067E14.5_Limb
mSE_05545chr12:88167425-88168264E14.5_Limb
mSE_06635chr12:88164354-88167003Heart
mSE_06635chr12:88167099-88168429Heart
mSE_07607chr12:88164350-88166876Intestine
mSE_08022chr12:88164142-88168369Kidney
mSE_08784chr12:88164499-88166449Liver
mSE_09024chr12:88164246-88167062Lung
mSE_09530chr12:88163698-88168944MEF
mSE_10068chr12:88163658-88168197Embryonic_stem_cells
mSE_10703chr12:88163818-88166446Olfactory_bulb
mSE_12065chr12:88164376-88166517Spleen
Enhancer Sequence
GTACAACCCC CCACCCCCAC CCCAGGTTCT GAAACACCTA CCCAGGGCCT TCTTCAGTGA 60
CAAATGAGAT GGATTTCACT CTTTTCTTTT CTTCTCTCTC TCTCTTTCTT TCTTTCTTTT 120
TTTTTTTTTT TTTTCCGAGA CAGGGTTTCT CTGTATAGCC CTGGCTGTCC TGGAACTCAC 180
TTTGTAGACC AGGCTGGCCT TGAACTCAGA AATCCGCCCG CCTCTGCCTC CCAAGTGTTA 240
GGATTAAAGG CGTGCACCAC TACCGCCCCG CTTCACTCTT TTCTTAATCT CTCCTTTTAT 300
TCTCAATGTT TTAATCTTTA TTTCTTACTT TCATGTATAT AGATGCTTTA CTAGCATGTA 360
AGTGTGTGTG CCATGTCTAT GTCTGGTGCT TGCAGAGACC AGAAAAGGGC ATCAAAGAAA 420
CCCCTTGGGA CTGGAGTTGT GGGCACTGGG AATAAAACCC AGTTCTTCTG GAAGGACAGC 480
CGGTGTTCTT CTGAACCCAT GAGCCATCTC TCCGGCCCTG CCCTGCCTTG CATATATGTT 540
CATATATTCA TCTCTCTCTC TCTTTGTTTT TGGAGACAGG GTTTCTCTGT ATAGCCCTGG 600
CTGTCCTGGA ACTCACTTTG TAGACCAGGC TGGCCTCGAA CTCAGAAATC TGCCTGCCTG 660
GGGGGGGGGG GCCCTGCTGG GATTAAAGGC GTGCGCCACC ACCTGCTGAG GCCATAAAGA 720
TAGATACCTC GGCTGTTCTC CCAGGGGACT CAAGTTCAGC TCTTAGCATC CTACTCATTA 780
CTGCCTGTAA CCCCAACTCC AAAAGACCTT AAATCTCTGA TTCATGTAGG CCACACACAC 840
ACACACACCC TTTAAAATGT CTTTTACCCT TTAAAATGTC TTTTTATGTT TTAATATCTA 900
ATTGCTAGGG CAGTATGTAG CTAAAGATGA CCTTGATCTT CAGATCTTCA TACCTCCACC 960
TCACAAATGC CGGGATTCCT GGTGTAGAAC ACCATTTAAT GTATGCAGTG CTGGGAATTG 1020
AACCCAGGGC CCTATTCAGT GTAGGCAAGC ACTCCACCAA CAGAGCCCAG GGCACTCTTT 1080
CAGGCTCCCC GCCCCCGCCG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG 1140
TGTGTGTTCC TCTCCTCTGT CTCTCTCTGT GTCTCTGTCT CTGCCTGTCT CTCTGTGTCT 1200
GTCTCTGCCT GTCTCTCTGT CTGTCTGTCT CTCTCCAAAC CCTCTCCCTG CTAACCAGAC 1260
CCCTCTGCTG GACCAGATGT ACCTGCATCC ATCCACTGGC CTCAGGATTC CATCCCCGTG 1320
AGGCTGGGAG CCACAGTGGC ACTGACTGGG CCTAGACAAC CCTTCAGATT TTCTTTGCCT 1380
CTTTTTCAAG CTGAGTAACC GTGCGGTGGC AGACGAGGCC CCGCCACGGA GCCAGCCAAC 1440
CAGCCACCGG GGCCCAGAGG CAGCTGGGGT CGCCATGGAA ACCGCTAGCG CAGCGCCTCG 1500
CAGGGTCTGG CCTTTTCACT TCGCCTTTTT GGCAGGCTTC CTCAGCCACC CTGAAACCCA 1560
TTCACCGGGC GAACCAGGCC CTCTCCCGCG GCCCCCTGCC TGCCCTTCGG TTCCCTTCAG 1620
TGAGTTCTGC CTCACCGCCC TCTTCCCCTC TCGGCTCCTC CCAGCCACCC TCCCTTCTGT 1680
CGCCCCAGCC AAAGCGCTGG GAGGGGAGAG CTGGGCCTAG GAAGGGCTCG GTTTTCAATT 1740
CTAAGCCGAT TTCCCCTCCA CAGGCAGTGA GCCCTTTCAT GCATTTCCCC TATTATCATA 1800
AACGCAGGAA CTTGCATTAG GATGAATGAG CAGGAACTCC TGTCTTTGTC AGAGCCTTGG 1860
CAGACCGCCA GCCATAGAAT GACCTAAAAC ACTCAGAATT AAATGGAGCT GGAGAGGGGG 1920
TGGAGATCCC TGAGGAGCGA GAATAGGGAA GGGGGTGGCC TCTGGTCTCT AATTATAATA 1980
ACAGAGCATT CGCGGTGTGT CCAGGCTCTG TGCTAAGCCT GGTGCACAGA TGCTCTTTAA 2040
ATCCTCACAG ACCTTCTACA TCCCCTTGAT CCCCATTTTT ATAGAGGATA AAACAAGAGG 2100
ACCAGAGATG TCAAGAAGCA GGCCCAAGAT TGCCCAGCAA AGAAATGATG GAGTAGGATT 2160
TTAGATCCTA GTCAACTAAA CTTCAAGGAC ATCCTACAGA GGGCTGGTAG CTCCACATAG 2220
CCAGCACTCG CGGACTAGAC AGACCCCTGT CTCCTCCCTG CCTTCAACTA TGCTCTATTT 2280
CCATCCTCGC GGTAATGTTA CAAACCAGGC TGGCTGCCCC AAATTGGATC TAGACACAGT 2340
TAGAGCAGCT CCAGGGAGAG CGAGTGGACA GTTCCCAACA CCGTGTCGGG TCATGTAGGG 2400
CAGACTGGTG GGCACAGCCT TAGCTTTATG CGCCAGCAGA TCACATGCTG GTCAGCAGTG 2460
TACACGCTGG CACGGGGCCA GTACCCAGCA GATGTGTTTA TCGGGTACTA GGCTGAGTGG 2520
GCCCCGCCCC ACTCCAGATC CAAGTCCCTC CTTTCTACCC TTCTAGGGGA AAGCAGGGGT 2580
TGAAGAAAAA GGAGGTCTGA GTGGGAGTAG TCCACGCTTG CTTTCCAACT GGGCCAGGTG 2640
GGCGTGGCTG CGGTCTTGCT AGGCAACCCT TCTGGGAAGC CTGGTCTAAC CCTCCGGCTC 2700
CACCCCAGAT ACTCACTACC CAGAGCTGAG TTCTTACCTT GACTACAACT AGGAAGGAGG 2760
CTTTCAGTGA CGTCCCCTTC TGGATTCTAA GTGTGCAACC TCAGCTTCCT TTCAGAACAC 2820
AGGCACAAAC TCACATCTCT TTTTGTTTCT TTTTTTCTTT TTTCTTTTTA CAGATGGCAG 2880
GAATCTAGCA GTGACTAAAA CAAGCCAAAT CTCCTGCCCT CAGGGAGCAA GGAACCGAAT 2940
CAGAGTAAGA CAGACAGTAA ACAAACACAT TAAAAAAAAT ACTATGTCAG GAAGTGGAAG 3000
TGCTATGTAT GAATGAACCA GCAGAAAAGA TCAATGAATA CAATCGTTGA GAGGTCAGGA 3060
TTAGACCTGA GAAACAGTCT TGTCTGAACC CCTCCATTTA CAAAGGAAGA CAAGGAGGCT 3120
CTGAGAGGAA GTGTAAGGTC AGGTGGTGAA TTATTGGCAA AAAGCTGGGC TGGGTTCCAG 3180
CTCTCCTTGG CTTTGCCATG ACCAAGGCCT GAGGGAGAAA ACTCAGCCGA TGGAAGTCTG 3240
AGAGTAGGGG AGACAGATGT CTTCCAGCTC TTTCCTGCTT TGAAAAGTTT TTTGTTGTTG 3300
TTGTTGTTTT GTTTTGTTTT TGACATGGTT TCACACGTTT CCCTGGCTGG TCTCAAATTT 3360
GGTATGTAGC TTAGGATAAC CTTGAACTTC TGACCTGTCT GCTTCTAGGT TCTGAGTAAT 3420
GGGATTTCAG CTGAGTCACC AGACTGGGTT TGGCCATGCT GGGGATTGAA CCCAAGGGCT 3480
TCTAGCATGC TAGGTAAAAA CATCTACCAA CATTCCCAGC CCCTTGTTCC CTTCTTTAAA 3540
AGCAATATTT TTGGGGTTTT TTGTTTGTTT GGTTTTTGGT TTTTCGAGTT TTTTTTTTTT 3600
TTTTTTTTTT TTTTAAGGGA CCTCAGGGCA GTGCTGAGTT TACCAGGAAG GTATTACCAA 3660
GCAGGAAGTT TGATGTCCTG GAGGCACCTG ACAGCTCTCA TGAACCCAGA GCAGTATGGA 3720
AGACTTGGAG GAGCAGGACC ATTTGGACGC ACGATGTTGG CAAGTGGAGG AGAGGCAGGG 3780
CTTGCACTTT CCTAGTGCCT AGCCTTTTGG GAAGGGTATT GTTCTTTTGT TGCTGACAAA 3840
ACCCTGACCA ACCCACAAGC AGGGCTTGGC TGGGAACCTG CGACTGCCCT GGGTGAGTGG 3900
GTCATGTGTT TCCCAAGCCC TCAAATTTCT CCCATTCTGC CGAGCTCGCC ATTCTGGCAT 3960
GCCCTCAGCC TCCTACTGGG CCGAGGGAAA CAGCCAATAG CCTTATGGAA CGGCCATGCA 4020
CACATCAGTC AGTTTCTGCC CAAACTCCAG GCATTACCCG AGAAGAGAGT CACTATCCCC 4080
ACCCACCACA AAGATGAACC AGCAATCAGG TGGTCCCCAC ATGACTTAGG AAGGCAGGGG 4140
AACATAGTGC TACAGAGGGA AGACTCAAGT GTCTACACAG GTTATGACAT AGCCTGACTT 4200
TTCTTCCTCG TGTCCCCTGC AGACCTGTCC TGGAGCACTT CCTGGAGTCT GCCAGACCAC 4260
TGTCTTGATT GGCTCAGAAC ATAGGCTGAT GTGGGCCACA CCCAGCCTTC TTCCCTTCCA 4320
CGTCCCTCCA GTGTGGGTTG CTCAGTGGAT CAGGCTTATC TTTGTGACCC TTGATGTCTT 4380
GGGTTCACAG CCAATGAAGT GTCCTGGCCA TGTGGCCCTG CACCAGGATC CTGGCCCAGT 4440
GGTCAGGCCC AGTGGTTCCC ATGGCAATGC CCTACCCTTG GACTGTCTCA TGGGCCCCAC 4500
AAGCCACTGG AATGTCTCAA AAATACCACC CTTCAGGCAA CCATCCAAAC CGCCTCTCAC 4560
AGACGGCAGC TCTCAATTCC AGCAACAGGA AAATCCTTTC AGAGCGTGTC CTGATTTTCA 4620
GCTTGGAAAA CAGATGGCCA CCATTGCAAA AGCTCGCCAT CCGCCCTCTT ATATCCTCTT 4680
CCCCCACCCC TCTCTCTCCA ATAGCAATGC TGTGGTTACA AACCTCAGGC AGAATCTGAG 4740
CTCAGATTCC AGTGTCTCCA TCTCTTCCCA GTCCTCCTAG CCTGTACAGC TCCTGTGGCC 4800
CTGGCCTTGT CATCCTTCGT GGCGATGCCA GTCAGCCACC TGCAGCTCTT GGGACAGACC 4860
AATGATTCTT TAAAGAAAAA GAAATTTTGT 4890