EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM137-23851

Organism

Mus musculus

Tissue/cell

Prostate

Coordinate

chr4:115846230-115846760

Target genes

Number: 13
Name	Ensembl ID

Mknk1	ENSMUSG00000028708
Faah	ENSMUSG00000034171
Nsun4	ENSMUSG00000028706
Gm12854	ENSMUSG00000078238
Uqcrh	ENSMUSG00000063882
Lrrc41	ENSMUSG00000028703
Rad54l	ENSMUSG00000028702
Pomgnt1	ENSMUSG00000028700
1520402A15Rik	ENSMUSG00000028701
Tspan1	ENSMUSG00000028699
Pik3r3	ENSMUSG00000028698
Mast2	ENSMUSG00000003810
Ipp	ENSMUSG00000028696

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr4:115846721-115846733	GTTTGTTTGTTT	+	6.32
RORA(var.2)	MA0072.1	chr4:115846539-115846553	TTTAAGTAGGTCAG	+	6.63

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03931	chr4:115845734-115850897	Cerebellum
mSE_11423	chr4:115845684-115847513	Placenta

Enhancer Sequence

CGAGGTTAGT GGGGAAGTAT GGAGGTGGAG AATCTGTGAC TTAGTGTCCT GCTTTTGCAC 60
TGTAAGGACA ACCTGTGAAA GTCTACCCTG AGAGCACACA TCCTCAGATG ACAAGAGAGC 120
TTCAGTGGAC AATGTCAGCC CTGGAACTGA GATGGAAGGC CTGGGGGGAG GTTGGGAGGG 180
GTGAGCCCAA GGGGCCAGTG GGGTTTTCAC AAATGCCTAT TTTTCTTTGT GTGCGTGTAC 240
ATATATGCAT GTGTGCATGT ATGTGTAAGC CAAAGGACAT CTGCCTTTTC TGGCGACACT 300
AGCCTAGACT TTAAGTAGGT CAGGCTGGCT AACAGGAGGG GTCCATGTGT CTCTGCCTCC 360
ACATTGCTGG CATTGATCAG CGTGTACCAC CATGCCCAGC TTTTTCATCC GGGTTCTGGA 420
TTGACTTGGA TCCTTAAAAG ACTAACACTT TACTGTGCTA CCTGTCAGCC TCCACATATG 480
GTCTTGTTTT TGTTTGTTTG TTTTTTTAAA TACCCTTCCT TCTTTTTTCT 530