EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM136-02235

Organism

Mus musculus

Tissue/cell

Pro-B_BM

Coordinate

chr4:133917110-133918210

Target genes

Number: 9
Name	Ensembl ID

Ubxn11	ENSMUSG00000012126
Sh3bgrl3	ENSMUSG00000028843
Ccdc21	ENSMUSG00000037443
E130218I03Rik	ENSMUSG00000086322
Zfp593	ENSMUSG00000028840
Trim63	ENSMUSG00000028834
Extl1	ENSMUSG00000028838
Paqr7	ENSMUSG00000037348
Fam54b	ENSMUSG00000046671

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr4:133917654-133917665	TTTTATTGCTT	-	6.32
Nr5a2	MA0505.1	chr4:133917159-133917174	ACTGGCCTTGAATTC	-	6.41
PBX1	MA0070.1	chr4:133917412-133917424	TTTGATTGATAG	-	6.18
Stat6	MA0520.1	chr4:133917814-133917829	TGTTCTCTGGAAGTG	-	6.35

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_07767	chr4:133916826-133918046	Intestine
mSE_11856	chr4:133917028-133918654	Placenta

Enhancer Sequence

GACAGGATCT CTCTGTGTAG CTCTGGCTGT CTTACACCTT GTGAGCCTGA CTGGCCTTGA 60
ATTCCTAGTC AGTCGGCCTC CACCTCTGGA GTGCAGTGAT TAAAGTCACG TGTCACTGCA 120
CTGAGCTCTG GGCTCTGACT TCAGGCGCAG TCCCCCTCCT GCTCTCTGAG GCCTATATTC 180
TCCTTGTCAT TTCCTGCTCT GCTCAGCCCA CACCTCATCT GCAGAGGTTC CCTCTGCACC 240
TTGGCCTAGC AACTTCCTCT GAGAGCCACC TGTATTCTCC TGGGGGTGGG AGGAGTAGTT 300
ATTTTGATTG ATAGTCACTT TATGTGCGTG AATGTTTTTG CCTGCAAATC TGTGAGCCAC 360
ATGCCTGTCT GGTTCCCTCA GAGGTACGAA GAGGTACCTG ATTGCTTGGA AGTGGAGTCA 420
CGGGTGGTTG TGAGCCATCA TGTGGGTGTT GGGAGCTGAA CCTGGGTTCC CCAAGATAGC 480
AGTAGTTTTA ACCAATGAGC CATTTCTCCA GCCCTGTTTT TGTTTGTTGT TTTATTTTCT 540
TTTGTTTTAT TGCTTTTGAG GCGGGATCTT CTTGTGTGAT CTTGGCTGGC CTTATCTTGC 600
CATGTGGCCC GAGGCTAGCC TGCCTCTAAC TCTCGGAATT TCTCCTGCCT CAGCTCAAGG 660
GCTAGAATTA CAAACAGGAG CGACCATACC TAGCAGGCAA CCTGTGTTCT CTGGAAGTGA 720
GACTGGGCGG TGTTGGTACT AGGAACCGCT GGCAGTATGA ATCAAGGAGA GGACTCCTCT 780
CCTGCCTGTC CTCTGGTCCT CAGCATTGGA AGCCCCAGGC CTGGCCCCAA AGTGACCACT 840
GAGTGAGAGA ATGAATGAAT GAATGAATGA ATGAATGAAT GAATGAATGC TTCTTTCTCC 900
AGCCTCACCA TGAGGCACCA GCTCTCCAAG GGCTTCACCA ATTCTGATGG TGTTTGGAAA 960
AAGAACAAGA AACCTGAGAC TTGAAGTCAG CAAGAATCTT TAGAAACAGT CCCTGTGCCT 1020
TCCCCCGGCT GTGTGGTCAT CTAGGCCCTT GCTCTGCTCT GCATTCACCC CGGATCCCAG 1080
AACCCCGGCC TTCAGCGAGG 1100