EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM133-03087

Organism

Mus musculus

Tissue/cell

Placenta

Coordinate

chr7:52650200-52650870

Target genes

Number: 19
Name	Ensembl ID

Rpl13a	ENSMUSG00000074129
Aldh16a1	ENSMUSG00000007833
Tead2	ENSMUSG00000030796
Rpl14	ENSMUSG00000046721
Trpm4	ENSMUSG00000038260
Hrc	ENSMUSG00000038239
Ppfia3	ENSMUSG00000003863
Lin7b	ENSMUSG00000003872
Snrnp70	ENSMUSG00000063511
Ntf5	ENSMUSG00000074121
Ruvbl2	ENSMUSG00000003868
Ftl1	ENSMUSG00000050708
Bax	ENSMUSG00000003873
Dhdh	ENSMUSG00000011382
Ppp1r15a	ENSMUSG00000040435
Plekha4	ENSMUSG00000040428
Hsd17b14	ENSMUSG00000030825
Bcat2	ENSMUSG00000030826
Rasip1	ENSMUSG00000044562

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr7:52650253-52650265	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr7:52650257-52650269	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr7:52650261-52650273	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr7:52650265-52650277	AAACAAACAAAC	-	6.32
Sox3	MA0514.1	chr7:52650385-52650395	AAAACAAAGG	-	6.02

Enhancer Sequence

TTATGTTAGC ATACTTTACT TAGCACTGCT TTCTTTTAGG CCCCCTTCAC CCAAAACAAA 60
CAAACAAACA AACAAACAGG TGTGAGATTT GGAGACGGAT GCTGCTATCC TGGTCAAGGG 120
AGTGACCAAC ATCTGCTTGA AGAAAAGCTC TTGGTAAGAG CTGAAAAACT TAAGGCTGGT 180
AACAGAAAAC AAAGGGGAAA AGGAGTAGGA GGTGTGGGAC CCAGGTCGAA GCCTCGCGCT 240
CTAGAGGTTG CTCGCTTCAT ACCTTTAAGA TTATGAAGTA GGGATTTCAA GGGAGGCCAT 300
AAGGATAATA TCCAGGAAGC CAGGGGCCTC TGCGTAAAAT ATCTAGGAGC CGAGAGACGA 360
AAGGAATTAT GGGTAGAGGT CCAGGATGCG ACCAAAAAAA AAAAAAAAAA AAAAGGCGAG 420
AAAAAAAGGC AACACACAAA CCGCAAGGGC CTGTGGGTAG GGGACCGCAG GAGATTGGGG 480
GAGGGGGATC CTGAGGGAAA GAAGGCTGGA GTGCCCAGAG AACTCTGGGT AAAGGATGGG 540
GGACGCAGAG GGAGAAGTCA AAGGCACTAA CCCGGGAAAC GGGCCACAGC AGCGGGGAAA 600
GGGTTCGGGA ACCCCGCAAG GGCTTGTGGG TAGCGGCCCC ACTCCCCGTT AAGGCCTCTC 660
ATTCACCCAC 670