EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM133-02424

Organism

Mus musculus

Tissue/cell

Placenta

Coordinate

chr4:118102430-118102950

Target genes

Number: 9
Name	Ensembl ID

Ptprf	ENSMUSG00000033295
Hyi	ENSMUSG00000006395
Szt2	ENSMUSG00000033253
Med8	ENSMUSG00000006392
Elovl1	ENSMUSG00000006390
Cdc20	ENSMUSG00000006398
Mpl	ENSMUSG00000006389
Tie1	ENSMUSG00000033191
Gm12857	ENSMUSG00000081233

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr4:118102773-118102791	GGGAAGGAGGAAGGCAGG	+	6.23
ZNF263	MA0528.1	chr4:118102778-118102799	GGAGGAAGGCAGGGAAGGGAA	+	6.42
ZNF263	MA0528.1	chr4:118102775-118102796	GAAGGAGGAAGGCAGGGAAGG	+	7.12

Enhancer Sequence

TGGAGGTGAG AGCCTGGGAG GCAAAGGGGA AGCCCGGGGG CACTGGTGTT CACCACAGAA 60
GTGGAACCCT AGGTTTGTTC AGGTACTAGA AAGGACAGAA GCAGGTGGGA GTCCCTGCAG 120
GGGACAGAGG CGAGAGGAGA GTCTTGGAAA AGGGCCAGAG GGACTTTACC TGGGAGAAGG 180
GGGTATGAGA GGAGTGGCTG AAGGGGAGAT TCTCTGGAGA GAAGAGTGTC TCTCAAAGCT 240
GAGAGATGAG ACTGCTTGCC AAAAAGGTTG AGGAAGTTCA CTGGGAAGAT GAACTGTGTT 300
GTGAGGAGAA AGGCTCCAGG AGACCTGGAA GGCAGGTCTC AGAGGGAAGG AGGAAGGCAG 360
GGAAGGGAAA CACTCGAAGA GAGTGGAGGG GAAAGGTGGG ACAGCTCCAT CCAGGCAGGC 420
CGGATGCTTC GGCAGCCGAT GTTCCAGACT GTCTCTTCTC CCAGTACACG CCTGCTCACC 480
ATGGCCTCAC CATGGCCAGG ATTCGACCTG GGGCCTTGTG 520