EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM133-02418

Organism

Mus musculus

Tissue/cell

Placenta

Coordinate

chr4:115746950-115747520

Target genes

Number: 7
Name	Ensembl ID

Atpaf1	ENSMUSG00000028710
Mknk1	ENSMUSG00000028708
Kncn	ENSMUSG00000073774
Nsun4	ENSMUSG00000028706
Lrrc41	ENSMUSG00000028703
Gm12952	ENSMUSG00000081459
Pik3r3	ENSMUSG00000028698

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXA1	MA0148.4	chr4:115747268-115747284	GTTTGTTTACACAAGT	-	6.46
Foxd3	MA0041.1	chr4:115747264-115747276	GTTTGTTTGTTT	+	6.32
IRF2	MA0051.1	chr4:115747310-115747328	GTTACACTTTCACATTCC	-	6.15

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_12699

chr4:115747126-115750302

Testis

Enhancer Sequence

ACACATTCTT AAACTGTCCC CAAAGGCACA AGTCCTCGGC CATCTCCATC CCAAAAGATA 60
AAGAACCGCT TTTTGTTGGA GATGCTGGGA AGCGAATACA GGGCTTGTTA ATGCTAGGCA 120
AGAGCTTTAC CATGAAGCTA CACCCCAACT CCTGAAAGCA CTTTTCCGAA GACTAGGGTC 180
CCCGAAATCT CCATAAATAA ATTCTGACCT AAGCTACGTT AAAGACTAAC GTTAGTTTTT 240
TGCTTCACGC ACTTATCAAG TTAGAACCTC AAAACATTTA TCAAATTAGA ACCTCAAAAA 300
CCTGGGGGGG GGTTGTTTGT TTGTTTACAC AAGTTTATCA GTGCAGCATT ATAAACTCCA 360
GTTACACTTT CACATTCCTG GTTTGGGGAA GCCAATCCCG AGAAAGACTA GCTATTAATC 420
TGCCCAAGGT CAACCAAAGA ATTCTGAAGG TAAGTAACGG AAACCACCTC TCTGGACCCC 480
GCAAACCCTA GGCTATAAAC CCGGACTAAG AGAGCCCCGG GAGGTGCTTT GTTGAGCTAG 540
GTCCCGGGCC CGCCAACCTC GAAGCCTTAC 570