EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM132-00623

Organism

Mus musculus

Tissue/cell

Peritoneal_macrophage

Coordinate

chr1:88375410-88376490

Target genes

Number: 4
Name	Ensembl ID

B3gnt7	ENSMUSG00000079445
Ncl	ENSMUSG00000026234
Ptma	ENSMUSG00000026238
Pde6d	ENSMUSG00000026239

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXK1	MA0852.2	chr1:88375861-88375875	GCCTTGTTTACAGA	-	6.21
TBXT	MA0009.2	chr1:88375814-88375830	TCCCACCTAAGTGTGA	-	6.19
TBXT	MA0009.2	chr1:88375814-88375830	TCCCACCTAAGTGTGA	+	6.3

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_02944	chr1:88330130-88420834	TACs
mSE_06338	chr1:88375157-88378626	E14.5_Liver
mSE_07256	chr1:88375426-88376799	Intestine

Enhancer Sequence

ATAAAACCCT AAGACACATG CTGAGTCCTA ACCACTAGGC TTCACCACCA GATCTAACCA 60
GTTTTAAATC TATTTCAACA CGCCTAAGTT TCACACGAGA CTTGCACCTG TAATACTCTT 120
TTGCAGCTCG ATCTATCAAT CCACAGCTGT CCTTAATGTT AATCCCACTG GATAAGAATA 180
AGACCACTAC CACAAACTTG AGCCAAATTT AAAGCAAGCT TTACTAAATG CTGGCCAGGA 240
TAATGGACAC TGGTCAGGTC CATTCCCAGG ATCCCCAGAG AACGGTCATG AATTATGTTA 300
GTCCATTGTT TACAAAGGCA AAGCCCACAA GGCTACATAC ACACTTCCCA CCTCCTTCAA 360
TGGAGGGCAA GCATCCATCC TGACACACTT CCTGCCTGTG CACCTCCCAC CTAAGTGTGA 420
TCAAGCGTAG ACTGTGCAGT TGGGGCAACC AGCCTTGTTT ACAGAAGCGA AAACATGTGA 480
CTTGTTATCT TAATTGAGCA ACAGTCCCCA GCATTTCAGG AAGTTATCTG TCCTTGGGCA 540
AGTGGGGCTT GCAGGTTAGA GGCATTTCTG GTATAGAGAT CTTTCAAGAA CAGAAATGTG 600
AACTTAAAGC GTAACGTAAG CCCTCGTGCT TAAGAGCATT CCTACTTTAT GTTATTGCTA 660
TAAGTGCAAG AACTGGTCTT GGGTCCAACT TGACATTAAG TTGTTCAACT AGGACTTAGG 720
ATAAAAGAGG CCAGTGCTAA TTAATGGTTA TTCTTGAGAG GAACAAGAAA ACCATGAAAT 780
CCTGGGGTGG TCAAAGGTTG AAAGTTGTAA AATCTGGGTG AGGTGGGTTA ATGAATCCTT 840
TCAATACTTT TCTGCTTTTT AGGGTTTTGT TTTTATTTTC CTGTTGGACT AGATTTTATT 900
CCTTGGTCCA ACCCCTGGGC TCTCAGCCAT TCTTTGTCTC AGCCTCACCA GTGCTGGGAT 960
AGCAGGAGCA AGCCATCGGA TCCCGCCAGT ACTTTAGTTT CTTCCTAGTT TTCAATTGTT 1020
TCTTATTTAT TTTTGTATAT GTTCAGGTAG TGTATTTGTA TGCACATGTG TGCACACTTG 1080