EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM132-00353

Organism

Mus musculus

Tissue/cell

Peritoneal_macrophage

Coordinate

chr1:60057100-60057850

Target genes

Number: 10
Name	Ensembl ID

Sumo1	ENSMUSG00000026021
Nop58	ENSMUSG00000026020
Bmpr2	ENSMUSG00000067336
Fam117b	ENSMUSG00000041040
Ica1l	ENSMUSG00000026018
Carf	ENSMUSG00000026017
Wdr12	ENSMUSG00000026019
Gm15464	ENSMUSG00000082609
Nbeal1	ENSMUSG00000073664
Cyp20a1	ENSMUSG00000049439

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HOXA13	MA0650.2	chr1:60057160-60057171	GTTTTATTGGT	-	6.32
KLF4	MA0039.3	chr1:60057248-60057259	GCAGGGTGTGG	-	6.62
POU3F3	MA0788.1	chr1:60057824-60057837	AAATTTACATAAA	-	6.07
RARA(var.2)	MA0730.1	chr1:60057332-60057349	AGGTCATACTGAGCTCA	+	6.04
Rarb(var.2)	MA0858.1	chr1:60057332-60057349	AGGTCATACTGAGCTCA	+	6.58

Enhancer Sequence

GGCTGGCTGG GATCAGAACA ACTTACTGAC TTTGGAGAGT ATTTCTCCAA TAGAGCCCAA 60
GTTTTATTGG TTTGGTCTGA GGAATATTTG TACTGTAGCA TTCCCGAAGT CAGTAGAGCT 120
ATCAGCTGGA AATGAGTAGG GCTGACCAGC AGGGTGTGGT CAGAGAAAGA TTCCAAAGTT 180
CTGACAAAGC TGCCACCACA TCCTCTTTTT AAAGAAAGTA CTTATTGAGA CAAGGTCATA 240
CTGAGCTCAG GACAGCTTCA AACTGGTGGC AACCCTACTG TCTCAGCCTT TTAAGTGCTG 300
AAATTTCAGG TGTAAGTCAC CATGTCCATC ATGGTACTTG AATTCAGAGG ACTATCTTTC 360
AGGAAAACTG AGGCAAACTT GAGTGTAGGG AGCCATCTAG TGCTAAACTA GTGGGAATGT 420
CCACAGGCTC AGAGATTACA AGCTGACTTT CTGGACAGGC GGCCACAAAC AAAGGCTTTC 480
ACTGTGAAAA CACAATCTAT AGATAAGAAA AAACATCTCA AAGACAGGCA ACTGAAGGAG 540
AAAATATGAG AACTGGAAAA CCCAAGAAAT GTGAAGAGTA TTAAATCATC TAGTCATTGT 600
AGTACAGAGG GGTCTTGAGC AGTAACTGAG GGCTTCCCAA GCGTAGAGGA GGCAGGAGAG 660
CCAAGGGACA CCAGCCACTC TCATAAAAGA ATAAGACATA CAGTAAGCTC TCCCCTGCTA 720
AGGCAAATTT ACATAAAGCT GTCCAATTCT 750