EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM130-06405

Organism

Mus musculus

Tissue/cell

PDC

Coordinate

chr5:124826880-124827650

Target genes

Number: 14
Name	Ensembl ID

Vps37b	ENSMUSG00000066278
Ogfod2	ENSMUSG00000023707
Arl6ip4	ENSMUSG00000029404
Mphosph9	ENSMUSG00000038126
2810006K23Rik	ENSMUSG00000047635
Cdk2ap1	ENSMUSG00000029394
Sbno1	ENSMUSG00000038095
Setd8	ENSMUSG00000049327
Gm15621	ENSMUSG00000082402
Rilpl2	ENSMUSG00000029401
Snrnp35	ENSMUSG00000029402
Rilpl1	ENSMUSG00000029392
Tmed2	ENSMUSG00000029390
Eif2b1	ENSMUSG00000029388

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr5:124827347-124827359	GTTTGTTTGTTT	+	6.32
IRF1	MA0050.2	chr5:124827361-124827382	AAAGCCAAAGAGAAAGCAAAA	-	6.51
IRF1	MA0050.2	chr5:124827367-124827388	AAAGAGAAAGCAAAAGAAAAA	-	6.93
ZNF263	MA0528.1	chr5:124827460-124827481	GGAGGAAAATGAGGAAGAGAA	+	6.33
ZNF263	MA0528.1	chr5:124827457-124827478	TGAGGAGGAAAATGAGGAAGA	+	7.17

Enhancer Sequence

TCATCAAAGT ATGCTCACAC ATGTACACAT AACCTTCTGA GGTTGGATGT CAGTAACTCA 60
TGTGGGGTAT ATCAGTAGAA GGCATGGGGT CCACTAGAGC TAGTCTCAGG TTCAGGTAGC 120
TGAGTCACTT AACATGGATG CCAGGAATTG AACCTGGATT TCCTAAAGGA GCAGAAGACA 180
CCCCTAACCA CTGAACCATC TCTTCAGCTC CCACCCCCGC CTTTTAGTTT AAGACAGGGT 240
TTCCCCAGCT GTCCTGGAAC TCACTCTACA GACCAGGATG TTTTGGAACT CAGAGATCAG 300
CTTGCTGAGT GCTGAAATTA AAGGTGTGTG CCTCCATGCC CAGCTCTCCA GCTCCTTTCT 360
TTTTCATTTG TTTGTTTTGA GGCCTGGTCT TGCACACTCT GACCTCAGGT CTGAATGTTC 420
CCAAGTGATG AGGCTGTAGA CATGAGTCAT CAAGCCCAAG CAGTAAGGTT TGTTTGTTTT 480
TAAAGCCAAA GAGAAAGCAA AAGAAAAACA GATGCAAGCA CACGGGCTCA CACGCGCTCA 540
CACAAACACA CACACAGACT CACACACACA GAGGAAGTGA GGAGGAAAAT GAGGAAGAGA 600
AAAGGAGTGG ATGCAAGTTT TACCAGAGGG ATAGGAATTA AGGCGATAAG TCAGGGTTTC 660
AATGTAGCCT AGGCTGGACT TCAATCCCTA AATAGATTAG GATGATCTGG AAGTGCTAAG 720
TGTAGGATTA TAGGTACTGA CTACCACGGC AAGTCTCTAC ATAAAATTCT 770