EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-28379

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr9:108114530-108117140

Target genes

Number: 27
Name	Ensembl ID

Ip6k1	ENSMUSG00000032594
Gmppb	ENSMUSG00000070284
Gm20529	ENSMUSG00000092218
Amigo3	ENSMUSG00000032593
Rnf123	ENSMUSG00000041528
Apeh	ENSMUSG00000032590
Bsn	ENSMUSG00000032589
Dag1	ENSMUSG00000039952
Nicn1	ENSMUSG00000032606
Amt	ENSMUSG00000032607
Tcta	ENSMUSG00000039461
Rhoa	ENSMUSG00000007815
Gpx1	ENSMUSG00000063856
Usp4	ENSMUSG00000032612
1700102P08Rik	ENSMUSG00000032611
Ccdc71	ENSMUSG00000049305
Lamb2	ENSMUSG00000052911
Usp19	ENSMUSG00000006676
Qars	ENSMUSG00000032604
Qrich1	ENSMUSG00000006673
CT010508.1	ENSMUSG00000092915
Mir425	ENSMUSG00000065579
Dalrd3	ENSMUSG00000019039
Wdr6	ENSMUSG00000066357
Prkar2a	ENSMUSG00000032601
Ip6k2	ENSMUSG00000032599
Celsr3	ENSMUSG00000023473

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr9:108116295-108116307	GTTTGTTTGTTT	+	6.32
Nr5a2	MA0505.1	chr9:108116982-108116997	GATGGCCTTGAACTC	-	7.49
PAX6	MA0069.1	chr9:108115199-108115213	CATTCAAGCATGAA	-	6.12
Sox3	MA0514.1	chr9:108114775-108114785	CCTTTGTTTT	+	6.02

Enhancer Sequence

TCAAGCCCTG GGCCTATTCC TGTATCCACT TACAGATATG CTAGGGTCCC TCTTTCCATG 60
GTCCCTATTA AAACCTATAC CACCTGTTCA GGTAAAGTGC CTAAAACCTT TCCTCAGACC 120
TTGTCACTGG CCCTTAACCT TCAGCTCTCT CCCCTGGCTA GGCCAACCTG CAAGGTTACG 180
TAGAAGGTTG GCTGCAGGAG CCACAGGAAA CCCTCTGAAG CACTCCCAAA TGAAGCAGTC 240
ATAACCCTTT GTTTTCTATC CTGTGGCCTT CTGCAAATGG TAAGTGTGGC AGTCACAAAG 300
CAGAGCTACA TTCAGAGAGA GAACACAGGT CTAGCTTGAG GCTAGAAGGC CAGACATCAT 360
GCCAAGTAAA ACAGCCAGAA CTGCAAGGGA GAATCACTCA TCCCACATCC AGATATATCA 420
ATGTCAGAAC TATACTTGGT TCCTCTCTCA AAGGCCTGGA CCACGGGACC ACATTCCAGG 480
CCAGCCAGTA CCCTTCTGAT CTGAGCTGTG AAGTACTTTA TCTGATGTTA ACTATCCTCC 540
CCTAAAAATT AATCTTTGGG ACTGGAGAGA TGGCTCAGTG GTTAAGAGTA CAACTGCCTT 600
ATAACTCCAG TTTCGGAAAA TCTGATGTCT TCTTCTGGCC TCTGCAGGTG ACTGCACACA 660
TGCCAGTCAC ATTCAAGCAT GAACATATAT ATTCAGAAGA AAAATCTCCC CAAAAGAGCA 720
GCTAAACACA GTTATAGCCA CTCAAAGAGT TCTCACAGTC AATCCTTCTC CCTAAGTCTT 780
GGCATCTATT TTTACTTTAT CATTTTATTT CTCAGCTCTT GCCAGTAATA AAATAAAAAA 840
ATAAAACAGG GAAGCCTCTA TTTTCAATAA GTATTTAAGT TGATGAGTCT GGACAAATAC 900
CATTCTGACA GCCCACTCCC AAGGACGCTT TCCTTTGGCA ACCCACACTT CCCGGTGTGC 960
CATGCTCACA AGGGGTCCAT TCAGAACCAG GGAACACCCA CTCGAGGCAG GAAGAAACTG 1020
TAGTTCATCT CACGCAGGCT GCAGTGCCAC AAAGCTCTCA AGCATCCCCC CCCCCAAAAA 1080
AGCCCCTTTC ATGAACCCCT CTTCCTGACT ACAGAGAGTA GCCATTGTTC TCAGGGAAAC 1140
AATTAGGCAG CCCATGCCAG CGGCTGAGCA GAGTCCCAGC AAGGGCTGCT CCCAGCCAGC 1200
CGACAGCTTG GGCTGAGGAA AAGTCCACAT TGTCTGAAAG CAAAGAGGCT GAACAAAGCA 1260
GGGGTGAAAA AAAGCCACGT CCACAGGCTG TGCCAAAGTG AGAGCTCTGA GAGGGCTCTG 1320
CAGGGACATC TTATCAATAT ATATATCACT CTTTCAGGTG ATATGAAGTG TTTCTTGCCT 1380
TTTTTGTTTT ATTTTTCCAG ACAGGGCCTC ACTCTGCAGC TGAAACTGAG CTCAAACTGA 1440
AAGAAATCCT CCTGCATGTT AAAATTTTAG GCTTGCTCCC TCCTACCTGA CACCAACTCT 1500
TCCCCAATTA CCCGTTGCTG CTGGCTCTCC AAGGTACAGG CTGGGCACAT AGGAGGACCT 1560
GCAGCCGGAG ACTCTCCATG ACAGACTACG ACCCAGACCC AACACCAATG TACAGAGGTT 1620
TTGAGAATTC AAACCAAGTT TGAGGTGGAA AGGAATCTTT ATTCACTCTG CCTGCTTAGA 1680
ATCATTTGAA GGTCTACTGG GTAACAGGAG ACAACATACA AAGTAACATA AAGCAAGAAT 1740
TTCAAGCATG TATTTATTAC TGAGGGTTTG TTTGTTTCTG TTTTATAGAC AAAGTCTTAC 1800
TCTGTAACCT AGGCTGGCCT TCAACCATCT CAGCCTCCTA GAATACTGGG TTTATAGGCA 1860
AGCACTATGG CGGGAGACCA GGACAGGCAT TTAAGAAGGT AACAGGGTTT GTGGGAAGGC 1920
TGCTTTCACT AGATGGAGAA CAGGACTCTA ATAGCTCAAA GGATGTTCAA ACTGAATCTG 1980
AGAGATGACA ATACTAAGAA AAAGGGCAGA AGGAAAGGAG AATAGAGCCA ACAGGCTGAC 2040
ATAGCCCTGA GAGAGGAGTA ACCAGAACAG AAAGGGGCGG ACGAAGAGAG GGTAAGAGAC 2100
AAAGAGCAAT GGGGAGAGAA AGGAGAGCTG GGGACAGAGT TCAGGGCCTA GATCTAAATG 2160
CCGATCAGTA ACAGGATACT GGGTAGATTC AAAATGACAA AATGTCTCTT ACTTTAGTAT 2220
GAAAAAGACT GAGTGAGTCA AGAACATAGA TAAAGAGCTT CCTGAGAAGG AACAAGGAAC 2280
GGCTTGGACA GAGGGTGACA GGCACGAAGG TGTCAGCTCT GACTTGGAGA CTATCCTAAA 2340
CAGAAATCCT GGTGATAACA TCTAAAGTAC TCTTTCTGTT GTTGCTTGTT TGCTTGTTTC 2400
AGACAGAGTC TCATGTGTTC AACCTGGTCT CAAACTGACT ATGCCAGCCT AGGATGGCCT 2460
TGAACTCCTA ATCTTCCTGC CTCCACGTCT CCAGGACTAG GATTATAAAC ATGTGCTGAC 2520
ATATTTGACC TAAAATGCTC CTTATGTCAG GTACGGTGCC ACACCACTTT AATGGGAAGA 2580
CACTGGCAAG CAGATCTCTG TGAACACAGT 2610