EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-28358

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr9:107522180-107522370

Target genes

Number: 27
Name	Ensembl ID

6430571L13Rik	ENSMUSG00000037977
Cacna2d2	ENSMUSG00000010066
Tmem115	ENSMUSG00000010045
Cyb561d2	ENSMUSG00000037190
Nprl2	ENSMUSG00000010057
Zmynd10	ENSMUSG00000010044
Rassf1	ENSMUSG00000010067
Tusc2	ENSMUSG00000010054
Gm9917	ENSMUSG00000053666
Hyal2	ENSMUSG00000010047
Hyal1	ENSMUSG00000010051
Nat6	ENSMUSG00000079334
Hyal3	ENSMUSG00000036091
Ifrd2	ENSMUSG00000010048
BY080835	ENSMUSG00000070285
Sema3b	ENSMUSG00000057969
Gnai2	ENSMUSG00000032562
Slc38a3	ENSMUSG00000010064
Sema3f	ENSMUSG00000034684
Rbm5	ENSMUSG00000032580
Rbm6	ENSMUSG00000032582
Camkv	ENSMUSG00000032936
Ip6k1	ENSMUSG00000032594
Gmppb	ENSMUSG00000070284
Gm20529	ENSMUSG00000092218
Amigo3	ENSMUSG00000032593
Apeh	ENSMUSG00000032590

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr9:107522351-107522369	GGAAGGGGTGGAGGAAGG	+	6.34
HSF1	MA0486.2	chr9:107522262-107522275	GAATATTCTAGAA	-	7.22
HSF2	MA0770.1	chr9:107522262-107522275	GAATATTCTAGAA	-	7.22
HSF4	MA0771.1	chr9:107522262-107522275	GAATATTCTAGAA	-	7.12
ZNF263	MA0528.1	chr9:107522348-107522369	AGAGGAAGGGGTGGAGGAAGG	+	6.89

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_01582	chr9:107504341-107548970	Th_Cells
mSE_04908	chr9:107520041-107523275	E14.5_Heart
mSE_09001	chr9:107520014-107522431	Lung
mSE_11363	chr9:107520068-107523249	Placenta

Enhancer Sequence

GCATCATCCT GAGCACAGAA ATGGAGGTCA GACAGACAGA CAGGTAAAGG AACAAACGCC 60
CTCCCGATGA TTAGAGAGCA GGGAATATTC TAGAACAGGG CCCAGACTGG TGTACTCTCA 120
GGCTCCCTAG GACAAGACTT GCCCTGAAGG CTTCTGGGAG CCAGGCAGAG AGGAAGGGGT 180
GGAGGAAGGG 190