EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-27877

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr9:64885040-64885600

Target genes

Number: 11
Name	Ensembl ID

Rab11a	ENSMUSG00000004771
Dennd4a	ENSMUSG00000053641
2010321M09Rik	ENSMUSG00000034263
Ptplad1	ENSMUSG00000033629
Dpp8	ENSMUSG00000032393
Igdcc4	ENSMUSG00000032816
Igdcc3	ENSMUSG00000032394
Parp16	ENSMUSG00000032392
Clpx	ENSMUSG00000015357
Pdcd7	ENSMUSG00000041837
Rasl12	ENSMUSG00000041696

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr9:64885544-64885556	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr9:64885540-64885552	GATTGTTTGTTT	+	6.92
IRF1	MA0050.2	chr9:64885475-64885496	TCTTTCTTTCTTTTTTTCTTT	+	6.34

Enhancer Sequence

TTACCTTGGT AAGTATGAGT TTGCACTTTC AGTGAGGACG CACCTCCTTT GGTGTGACTG 60
CCAACTGTAA TCCAGAATTG ACTCTGTGAC TTTTTTACTT TCTTTCTTTC TTTCTTTTAA 120
ATTTATTTAT TTATTTTATG TATGTGAGTA CATTGTAGCT GTACAGATGA TTGTGAGCCT 180
TCATATGGTT ATTGGGAATT GAATTATTAG GACTTCTGCT CACTCAGTCC CTGCTTGCTC 240
TGGCCCACAG ATTTATTTAT TTATTATTAT ACATAAGTAC ACTGTAGCTG ACTTCAGACA 300
CACCAGAAGA GGGTGTCAGA TCTCATTACA GATGGTTGTG AGCCACCATG TGGTTGCTGG 360
GATTTGAATG CAGGACCTCT GGAAGAGCAG TCAGTGCTCC TACCTGCTGA GCCATCTCTC 420
CAGCCCTGAC TCGTTTCTTT CTTTCTTTTT TTCTTTTTTG TTTGTTTTTT TTTTTTTGTT 480
TTGGTTTCTT TTGGTTTTTT GATTGTTTGT TTGTTTGAGA CAGGGTTTCT CTGTGTAGCA 540
GCCCTGGCTG TCCTGGAACT 560