EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-27201

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr9:20779780-20781040

Target genes

Number: 19
Name	Ensembl ID

Zfp266	ENSMUSG00000060510
5730577I03Rik	ENSMUSG00000062470
Ubl5	ENSMUSG00000084786
Fbxl12	ENSMUSG00000066892
Olfm2	ENSMUSG00000032172
A230050P20Rik	ENSMUSG00000038884
Angptl6	ENSMUSG00000038742
Ppan	ENSMUSG00000004100
snoU105B	ENSMUSG00000089571
Eif3g	ENSMUSG00000070319
Dnmt1	ENSMUSG00000004099
S1pr2	ENSMUSG00000043895
Mrpl4	ENSMUSG00000003299
Zglp1	ENSMUSG00000079681
Fdx1l	ENSMUSG00000079677
Raver1	ENSMUSG00000010205
Tyk2	ENSMUSG00000032175
Cdc37	ENSMUSG00000019471
Slc44a2	ENSMUSG00000057193

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REL	MA0101.1	chr9:20780308-20780318	GGAAATCCCC	-	6.02
Stat6	MA0520.1	chr9:20780711-20780726	TGCTTCCTGAGAACC	+	6.08

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_05707	chr9:20779904-20782308	E14.5_Limb
mSE_10188	chr9:20779798-20784244	Embryonic_stem_cells
mSE_11219	chr9:20778847-20782139	Placenta

Enhancer Sequence

GCTACCAAGT TCACCCTCAG CCTCTCTTGC TTGGTGCAAG CGAGGCAGGC GCATGAATGA 60
ATGAAAGAGC CTGAAATTGG GGGGCTCGTT CGCATGCAAA GCATGGGGAC ATCTCCTGGC 120
AGCACCCCTA CCCTACCACT ATAGGAAGCT GAAGCCGGGC GCGTCTCCTT GGCGACAGTA 180
AGACCCGCCT GGCTCAGGCA GCACTCTCCA GCTCCTTATC AGGCCGAGGA ATGCGTGGTA 240
TCCACACTCG CTTGCGCTGG GGCGGCGCCA TCTCTCTCTC CTGAGACCCC GACACGCGCG 300
CAGGATGTCC CTATCCTGCA CAAAGCAACA GGGGGTGGCC ACATTTCTGC ACCCCACCAG 360
AGGCCCCCCA CATCCAGATT CCTGGGGCAC TGGAGAGAGT AACTACAGCT ACTTCATTCC 420
CTCCCCCCCC CTCAGTGATG CTCCCATGTT GCCCCGCAGG GGACAGTAGG CTCTGCGGGT 480
GTCGCCTCGG GCATCTAACA ACAAGGATAG GGACGGGGGT GGGGAGGTGG AAATCCCCGG 540
GTGAGTCAAC CCATGCTCTA GAGGGGGGCG AGGTCCCAAC GCCGTGTAGC CCGCGACAAC 600
GCGGACTCCA CGCCACGCGT GCCTTCCTTC ACTCCTACGC CCCATCCCTG AGCTAGGAAA 660
AGGAGACACC TGGACTTTGC AGTTAATGTC CCTTTCCTTC GATACAAAGT GATTCTTCCG 720
AAAGAGAGAC TGAAAGAGAG GGGCAACTAA CTGGAAACTG AGGCAAAAAA CTAGTCTCAC 780
AGGCGGTGGG GCGACGGCCT TCGCCGGGGA CCCCGCCCAT GAACTCTGAA AGCTTTCCCC 840
GCTCGCTCGT CCGTAGCACC TTTCATCCTA GCCGGAGACA GAGAAGAAGG GATGCTGCAC 900
CTCTCCCCAA CAACCTCACT GCCCCAAACC CTGCTTCCTG AGAACCCCCA TCCAGTCTTG 960
CAAAGTCTCC AGCTCAAAGC GCTCGGATTC CGCCTTTCTC TTCAGCGCCA ACTTCCTGCC 1020
CGAAGGAAGG CGGGGAGCTC AGTCTGGGGG TGCGCCACTG AGTAGGTGGC GAGCTGCCTG 1080
GAGTAGTGGG CAGGGGCGCA TGGTAGATGA TCTGTTCCCT CGGTGCAGCA GAGCCTGGAG 1140
CAGCGCGTGC AACGCCTGTA CGAGCGCCTG ACCCCGGACC GGGCCCCCCA GCTGGGATCT 1200
CAGGGTCTCC GTGAACCGCG GCCGCCCAGA TCGGAACCTC CCCTCTGCCC CGCGCGCTCA 1260