EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-24126

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr7:52720100-52720550

Target genes

Number: 32
Name	Ensembl ID

Med25	ENSMUSG00000002968
Prmt1	ENSMUSG00000052429
Scaf1	ENSMUSG00000038406
Prr12	ENSMUSG00000046574
Snord35b	ENSMUSG00000064767
Rps11	ENSMUSG00000003429
Snord35a	ENSMUSG00000065818
Snord32a	ENSMUSG00000065219
Rpl13a	ENSMUSG00000074129
Ccdc155	ENSMUSG00000038292
Dkkl1	ENSMUSG00000030792
Tead2	ENSMUSG00000030796
Rpl14	ENSMUSG00000046721
Trpm4	ENSMUSG00000038260
Hrc	ENSMUSG00000038239
Mtag2	ENSMUSG00000049661
Ppfia3	ENSMUSG00000003863
Lin7b	ENSMUSG00000003872
SNORA67	ENSMUSG00000084519
Snrnp70	ENSMUSG00000063511
Gys1	ENSMUSG00000003865
Ruvbl2	ENSMUSG00000003868
AC151602.1	ENSMUSG00000076036
Ftl1	ENSMUSG00000050708
Bax	ENSMUSG00000003873
Dhdh	ENSMUSG00000011382
Nucb1	ENSMUSG00000030824
Plekha4	ENSMUSG00000040428
Rpl18	ENSMUSG00000059070
Cyth2	ENSMUSG00000003269
Kdelr1	ENSMUSG00000002778
U4	ENSMUSG00000088555

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxj3

MA0851.1

chr7:52720126-52720143

AACAAATAAACAAACAA

6.12

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_09751	chr7:52720090-52722263	MEF
mSE_10173	chr7:52720117-52723413	Embryonic_stem_cells

Enhancer Sequence

CAAAAAAAAA AACAACAACA ACAAAAAACA AATAAACAAA CAAAACCCCC CCAAAAAAAA 60
TAGGTCTTAG GTTTAGGTAG CTCAGGATAG CCTGAAACTC AGTATTTAAC TGCAGCTAAC 120
CTTCAACTCC TACCGCAAGT CCTGGAATTA CAGGCATGTG CCACCAGATC AGTTTAAGAC 180
CACCTACACT GAGAAATCTT TCTAGGTTTC TCTGGCCCAT CTCAATAGTC TACCTTACAT 240
GTATCCACCA TCAATCAGAG CGCCATCAAG GAAGGGCTAG CTTGCGCTGT TTGGAGCAGA 300
GTTCAGGTGC TGGAGATAGC CCACCACACA TTAGGGCCGA TACATTTGTG GAATGACTAA 360
ATGAAGGTAC AGGCATTTAT TACACAGCCA TCTCTCTCTG TTCCCTGGTC CTCACAGACC 420
TGAGCGGGGT GCACCTCTGG GCTCGTCCGG 450