EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-23974

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr7:31372620-31373370

Target genes

Number: 20
Name	Ensembl ID

Zfp260	ENSMUSG00000049421
Polr2i	ENSMUSG00000019738
Tbcb	ENSMUSG00000006095
Clip3	ENSMUSG00000013921
Sdhaf1	ENSMUSG00000074211
Lrfn3	ENSMUSG00000036957
Tyrobp	ENSMUSG00000030579
Aplp1	ENSMUSG00000006651
Gm1082	ENSMUSG00000062132
Arhgap33	ENSMUSG00000036882
Hspb6	ENSMUSG00000036854
BC053749	ENSMUSG00000036864
Tmem149	ENSMUSG00000036826
Zbtb32	ENSMUSG00000006310
Upk1a	ENSMUSG00000006313
Cox6b1	ENSMUSG00000036751
Rbm42	ENSMUSG00000036733
Gm17478	ENSMUSG00000087359
Tmem147	ENSMUSG00000006315
Gapdhs	ENSMUSG00000061099

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4

MA0039.3

chr7:31372792-31372803

CCACACCCTCC

6.32

Enhancer Sequence

AATGAGGGCT AATTCCAACT TAAAACAAAG TAGGTCCTCC ATTTACACCC TTGCAGGGCA 60
TTCTTAAAAA TGGGGAGTGT TTGGGGGAGA TGAGAGGTGG AGCAGATGGT TTATCATATT 120
AGAATCCACT CTGAGCCCTC AGAGGACAGC TAGCTCTCCT AAGCAATAGA ATCCACACCC 180
TCCTGCCTTC TCCAAAAGGC TGAGAGGGAT AAACCATGAC TGCACTCACT CCAGATTCAA 240
GACTCAGCAT TCATTCTATC CCTCTTCAAC CCGCGCCTAA GAAGCCTCCA CCACTCTACC 300
TTAGAACCAG AGAGCAACTG GGGCCCTGGT GGAACCAGGG CAGGGATATG TCGCGGATTT 360
TAAGGGCCAA GGAGGCAGCC TGCAAGTAAG AGCCCAGGAG GCTCTCTAGC CTTGGTCAAT 420
TAAGGCCACG CTGCTGCTGT CAACCACCGC TGGTCCGGCA TGCAATCCCT ATGGCCTCTT 480
CACCCACTCC TGTCCTGCTC TGCCATTGCT ACCGCGAAAG ATCAGCTCAG GACACCAATT 540
GGGCTCCAGG CGTCTAGCTG CAGTCAGGGT TTCTCTGATC ACTTTCAAAG GCCCTAGCTA 600
CCCAAACGCT CCACGCAGCC TGCTTCCTTC GTGCTTCTTT CCAGGAGCCC CGAGAATCCC 660
ACTTGTCCAC AACACCCTTC GGAGCTATCC GGAGCCCTGC AAGCCCCTGG CCTCCGCCCT 720
ACCCGGCGCT AGAGACACCT CCGACCGCCT 750