EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-23784

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr7:20163300-20163830

Target genes

Number: 29
Name	Ensembl ID

Irf2bp1	ENSMUSG00000044030
Dmwd	ENSMUSG00000030410
Qpctl	ENSMUSG00000030407
Snrpd2	ENSMUSG00000040824
Opa3	ENSMUSG00000052214
1700058P15Rik	ENSMUSG00000089636
Vasp	ENSMUSG00000030403
Rtn2	ENSMUSG00000030401
Ercc1	ENSMUSG00000003549
Cd3eap	ENSMUSG00000047649
Ppp1r13l	ENSMUSG00000040734
Ercc2	ENSMUSG00000030400
Mir343	ENSMUSG00000076315
Klc3	ENSMUSG00000040714
Mark4	ENSMUSG00000030397
U1	ENSMUSG00000065388
Bloc1s3	ENSMUSG00000057667
Trappc6a	ENSMUSG00000002043
Nkpd1	ENSMUSG00000060621
Ppp1r37	ENSMUSG00000051403
Gemin7	ENSMUSG00000044709
Zfp296	ENSMUSG00000011267
Gm17375	ENSMUSG00000092002
Clasrp	ENSMUSG00000061028
Clptm1	ENSMUSG00000002981
Apoe	ENSMUSG00000002985
Gm20512	ENSMUSG00000092381
Tomm40	ENSMUSG00000002984
Pvrl2	ENSMUSG00000062300

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr7:20163573-20163594

ATTTAGTTTCACTTCTCCTTT

6.81

Enhancer Sequence

CCATCTCAGG TAAGTAATTC AGGGTGCAGT TCACTCCTGA TCCAGGGTTG GGCTTCCTGC 60
CCTGCGGAGG AGCTAAGGTG GACAGATGGG GCACCAATCA TTACTTCCCT TTTCTCCTTG 120
ATCCCCTTAG GGTAGAACCT AGGCGTGGCT TGGTCTTGCC TGTCCTAGGG CAGGGACTAG 180
AGATGGGGCG GGGGCTGGGC AGCGAGAGGA AGGCCACCCA CAAGGTGTGG CCAGCCCCAG 240
AAGACTGGCC CGGGGTTTTG CCATACACCC CTAATTTAGT TTCACTTCTC CTTTCCCGTG 300
GACAGAAATA ACTGACCAGG TGGCTGGACC GGGGTTGGCA GTAGGGACCT GGTGGAGGAT 360
GGGACAGTGG CCTGGGGAGC CGAATGGAGG GTACTGCACC TATTGTGTTT TGATCCTTCT 420
TATTGAGGTT CAGACAGTTC AGAACCAAGG AAGGGGCATC AGGCTTGTTC CCCTTCCGGA 480
TCTCCCAGCC CCTGGGAAGC CCCTGGTCTG GGTGCTGCAT ACTGTCCTAT 530