EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-23776

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr7:19973600-19975450

Target genes

Number: 33
Name	Ensembl ID

Nova2	ENSMUSG00000030411
Irf2bp1	ENSMUSG00000044030
Sympk	ENSMUSG00000023118
Dmwd	ENSMUSG00000030410
Mir3100	ENSMUSG00000092659
Six5	ENSMUSG00000040841
Fbxo46	ENSMUSG00000050428
Qpctl	ENSMUSG00000030407
Snrpd2	ENSMUSG00000040824
Gipr	ENSMUSG00000030406
Eml2	ENSMUSG00000040811
Gpr4	ENSMUSG00000044317
Opa3	ENSMUSG00000052214
1700058P15Rik	ENSMUSG00000089636
Vasp	ENSMUSG00000030403
Rtn2	ENSMUSG00000030401
Ercc1	ENSMUSG00000003549
Cd3eap	ENSMUSG00000047649
Ppp1r13l	ENSMUSG00000040734
Ercc2	ENSMUSG00000030400
Mir343	ENSMUSG00000076315
Gm17574	ENSMUSG00000091384
Klc3	ENSMUSG00000040714
Mark4	ENSMUSG00000030397
U1	ENSMUSG00000065388
Bloc1s3	ENSMUSG00000057667
Trappc6a	ENSMUSG00000002043
Ppp1r37	ENSMUSG00000051403
Gemin7	ENSMUSG00000044709
Zfp296	ENSMUSG00000011267
Clasrp	ENSMUSG00000061028
Clptm1	ENSMUSG00000002981
Tomm40	ENSMUSG00000002984

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr7:19975141-19975159	GGGAGGGAGGAAAGCAGG	+	6.03
RREB1	MA0073.1	chr7:19974127-19974147	CCCCACCCCCCCACCCCCCC	+	6.16
RREB1	MA0073.1	chr7:19974130-19974150	CACCCCCCCACCCCCCCAGC	+	6.27
ZNF263	MA0528.1	chr7:19974339-19974360	GCCTTTGTCTCTTCCTCCTCC	-	6.23

Enhancer Sequence

GCCAAGGGTG AGCTCGCCTT TCTACTGGGG ATCTGACAGC AGGACTTGGG GGTCAGCCAC 60
ATGGGTGGGG CATTAGCAGG GGGCAAGACC ATACAGAGTG CCTGAGTGAG GAGCCTCGTG 120
GTCAGATTCT CGTGTTCAGA GAACAAGTGT GTGGGCTGTG CTGTGGCACT GACCAGAAGG 180
ACACTAGGGG TCACCTCACC ATCAGTGGGG TGAGGAGTCC TCGTGTGTGA CTGAGGGCAC 240
CAGGGAACCA TGGCAGGTTC TGGGCAAGGG ATGCACTTGG TGAGATTGTT GCTTTCGAGG 300
TTCATGTAGC AGGAAGATGC AGAACTGTGG ACAATGGGGA CAGGAGAGTG TGCTGGGGAG 360
AACTATGGGA GGAAGAGGCC AGGATGGAAA AGCATGGCGC TGGGCATGAA GCTCTCAAGG 420
GAGGCAGATA CAGACTGATG ATCCACAGAG GCCTGCCTCC CAGGACCTTC TGGGTCCGTC 480
ACTTGGGTCC ATCTGTCATG TTTCCTCTGT CCATGTGTTG TGTGCTGCCC CACCCCCCCA 540
CCCCCCCAGC TCCACACTGA GTTTTCAGGC TTATCCCTGG GGATTACTGC CGTAGCCAGG 600
AAACCAGGTC AGCTGGCATC CTGCAGCTGG GCCAGCCTGG GCCTCGGAAG GAGGAGGCCC 660
CCCCCATCAG CCCCACTGCA GGCTGTTGGC AGCTGCCTGC TTCCTTAAGC TTTCAGCACT 720
CACCATGCCC CTTTCTTTGG CCTTTGTCTC TTCCTCCTCC CCCACCTACA ACATCACAAT 780
CGGTAGAAGC CTCCTTGTCT ACGCCTCCTA TCACCTGCCT GAGTCCTTCA GCTTTCAGAA 840
AGGCACCCAG CCCACCCTAT GCGAGGCCTG CCCCTTCTCT ATTCCAGCTG CGCCTGGGAT 900
CATTACTCTC TGGATAGCTG TCTCCCCTAG TACAAGGGAG CTCTTATGGG TGGGACTGAG 960
GCTGTGTTGG TCACTGCTGT GTCCTTGGCA AGGGCTGGAC ACGTAAGACC CGATCATTTT 1020
TGCCAAGTGA AACAGAACCC ATGAATGTAT TCATTTGTTC AGTTAGCAAA TGGGGCCAGG 1080
CCCAGCACTA CTGAAACAGC CTCATCCTCC CCTTCCCGGA GTCACAGCCT GGGGGAGAAT 1140
GAGGAGCAAA GATGGTTCCA GGTGACCCTG GGAAGTGGAG CGGTGCTGCA AGGAGCCATG 1200
GCACTGTCCT CTGGGGCAGG GATTCAGCCA AGTGGAAGCT GGCACAGCAG CTCAGGGCAA 1260
GGGGGCCCTC AGGTGTCTCA CAGTGGGACT CTGGAATATG AACTATCCTT GTTTTTCTTG 1320
TCCTTGGTTG TGAAGTGTTA TCCCAGTCAT GGTACCCTGT GCTGGCAACA GAAAAAAACC 1380
AACAACAACA ACAAAAAAAG CCAGTCAGGA AGGCACCCAA GGCCAGGTCC ACCTGGTTAC 1440
CAGCCTCTTA CTGCCAAAGC CATTGCTGCT TCCCTCAGGA GCGGCCCTCT TCCCTGCCTC 1500
TACTTAGCCT GTGTTGGTGG CAGAGAGGCA CGGTGAGGAA TGGGAGGGAG GAAAGCAGGC 1560
AAATCTTGCT CTTCAGCCTG GGAGAGTGCA TGACACCCTT CTGGGGTCAT GGGAAGTGTG 1620
GAAACTGGCA AACTTGGGGT TCCATGACAT GTCTCTGGTT GCTCTGCGGG GACAGGAGTG 1680
AGAGCCTGGA GGACAGAGGT GCCTGGGGAA TGGCGGGCTT GGCTACCTGC GGGACCATGT 1740
ATGAAGCCAC AGCTCACTGC TTCTGCACCT GAGGGTTTGC AGAAGTGGGC AGGCTGGGGC 1800
AGTTCTGTCC CGGGGTGATG AGTGACTGAG ACTCCCCGGC CTCTCCCTCC 1850