EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-23095

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr6:113334170-113335480

Target genes

Number: 22
Name	Ensembl ID

Srgap3	ENSMUSG00000030257
Thumpd3	ENSMUSG00000030264
U6	ENSMUSG00000077431
Gt(ROSA)26Sor	ENSMUSG00000086429
Setd5	ENSMUSG00000034269
Lhfpl4	ENSMUSG00000042873
Mtmr14	ENSMUSG00000030269
Gm16161	ENSMUSG00000090194
Brpf1	ENSMUSG00000001632
Gm15492	ENSMUSG00000085012
Ogg1	ENSMUSG00000030271
Camk1	ENSMUSG00000030272
Tada3	ENSMUSG00000048930
Arpc4	ENSMUSG00000079426
Ttll3	ENSMUSG00000030276
Rpusd3	ENSMUSG00000051169
Jagn1	ENSMUSG00000051256
Creld1	ENSMUSG00000030284
Fancd2	ENSMUSG00000034023
6720456B07Rik	ENSMUSG00000033940
Vhl	ENSMUSG00000033933
Sec13	ENSMUSG00000030298

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Mecom	MA0029.1	chr6:113335441-113335455	TTTTATCTTATCTT	-	7.82
RREB1	MA0073.1	chr6:113335326-113335346	CCCCACCCCAGCACCACACC	+	6.09
RREB1	MA0073.1	chr6:113334584-113334604	TGACATGGGGTGGTGTGGGG	-	6.11

Enhancer Sequence

GGTGAGACCT GTGCTCTGGT TCTTTGTAAT TCCCAGGGTT CTGTTTGTGG GTGGACCCAG 60
CGTGTTTGAT TTTTGTAGTA TTGGGGGTGG ATCCCCAGGC CTCGCACTGC CGGGCAAGTT 120
ACTGTGCTAC ACCCTGGGTC TGTAGGATTG CAGCCCGTGG GCTGCTGCTT CTCCAGCTTA 180
GGGTTTCGCT GCCTGGGCTG AGTCAGCCTG GACCGGATAG CAGGGATGTC TCCCAGGAGA 240
AGCCCAGAAG GTGGGTCTAC AGCGCCCTCC TCCTCCTCGA ACCTTGGGCC CAGTCACAGA 300
CAAAACAGTG ATTGCAGAAT CCTTCCTGAC GTGGTGTGGT GGGCATGCTT GCACTCTCAC 360
TGTGGAGGGG GCTAAGGCAG AAGACTCGGG AGTTAGAGGC CATTCTGGGC ACATTGACAT 420
GGGGTGGTGT GGGGGGTGGG GGGAGACAAC CAAAAAAGCA AGACAAAAGC TTTCCTACCA 480
ACTGAAGTCC AGCCGCTCAG TGCCACAGTG AACAGTGACT TGCTTGTTGT CTGCCTTTGT 540
AAGTAAAGGC AGTGACAGCT ACATAAGCTT CCTGCCAAGT CTCCCTGGTG ACCTGGCAGC 600
CACCATGTTA GAGCAACAGA GACCATCACA CAGCACACCC AGTGTGTTGC CTTAGGTGCT 660
CTGCACCCTG CTCTCTGTCC TCACTCTAGC CTCGGGGCTC ACTCTTCCTC ACACCTCCTC 720
CTGAAGCAAA CTCCCAGTCC CACCCTTCCC CAGGTCAGCT CTCCTGTGGT TTTCACTGTT 780
GAATTGGGGT CTTTAAGATT TATGCTCCCT TTATTCCCTT GGCTCATTCC AAATGCAGGC 840
CTGTTTGTGT GGCGGGGACA TCTAGCCTGA CACACAATTT TGTTTTTCTT CTTTTTTTTT 900
AAGGTTTATT TATTATAAAT AAGTATACTA TTACTGTCTT CAGAGACACC AGAAGAGGGC 960
GTCAGATCTC AATACAGGTG GTTGTGAGCT ACCATGTGGT TGCTGGGAAT TGAACTCAGG 1020
ACCTTTGGAA GAGCAGTCAG TGCTCCTACC TGCTGAGCCA TCTCACCAGC CCTCTGACAC 1080
TCGATTTTGA ACTGGGTTCA GTTGCTTGTG TCCAGCAGGT GCACAAGTGC ACACTTACCC 1140
ATGCTCTACC TCCTCCCCCC ACCCCAGCAC CACACCCAGT GGATTGCTGG CTCAGGAGAA 1200
AATGGTAGAA GCCAATTGGA AGCCTGTGAG TGGGGAAAAG ATGTGACAAG GAGGTGTCCC 1260
TACGGAGCTA ATTTTATCTT ATCTTTCCCT TCCCCGATGA CTTCCCTCCC 1310