EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-23093

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr6:113326960-113327300

Target genes

Number: 22
Name	Ensembl ID

Srgap3	ENSMUSG00000030257
Thumpd3	ENSMUSG00000030264
U6	ENSMUSG00000077431
Gt(ROSA)26Sor	ENSMUSG00000086429
Setd5	ENSMUSG00000034269
Lhfpl4	ENSMUSG00000042873
Mtmr14	ENSMUSG00000030269
Gm16161	ENSMUSG00000090194
Brpf1	ENSMUSG00000001632
Ogg1	ENSMUSG00000030271
Camk1	ENSMUSG00000030272
Tada3	ENSMUSG00000048930
Arpc4	ENSMUSG00000079426
Ttll3	ENSMUSG00000030276
Rpusd3	ENSMUSG00000051169
Jagn1	ENSMUSG00000051256
Prrt3	ENSMUSG00000045009
Tmem111	ENSMUSG00000030286
Fancd2	ENSMUSG00000034023
6720456B07Rik	ENSMUSG00000033940
Vhl	ENSMUSG00000033933
Sec13	ENSMUSG00000030298

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr6:113327198-113327210	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr6:113327202-113327214	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr6:113327206-113327218	GTTTGTTTGTTT	+	6.32

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_11689

chr6:113326518-113329918

Placenta

Enhancer Sequence

GATACTAGTG TGCCCTGTCT TCCTATGTCC TCTGTTTCCC TACGTTGGGT CGTTTCTAGC 60
ATTCTATTTG ACAGGGTTCT CCCTGCCTCC TCTTGTCTCA CTCCATTCCA CCTCTGCACC 120
TTCTCTGTGT CCCTGGCTAG TTTGGAACAC AGGCTGGTCA GGTGAACAGA ACTAAGTTCC 180
AGCCCATTTT CTTATGTGCG TTTCTAAACA TGTTATTTAA CCTGAATCTC CGGTTTTTGT 240
TTGTTTGTTT GTTTGTTTTT CTTTTTTCCA GGACAAAAGA TGATGCCTCA GTCTATTTCC 300
CCATTAAGAA GTATAAATCT GTAAAATGGG GGCATCGAGA 340