EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-22591

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr6:72058760-72060080

Target genes

Number: 7
Name	Ensembl ID

Mrpl35	ENSMUSG00000052962
SNORD94	ENSMUSG00000080465
Ptcd3	ENSMUSG00000063884
Gm16601	ENSMUSG00000086723
St3gal5	ENSMUSG00000056091
Usp39	ENSMUSG00000056305
Rnf181	ENSMUSG00000055850

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RAX	MA0718.1	chr6:72059309-72059319	GTTAATTGGC	-	6.02
TGIF1	MA0796.1	chr6:72059407-72059419	GGACAGCTGTCA	-	6.11

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01040	chr6:72059229-72074658	Myotubes
mSE_06111	chr6:72056888-72061477	E14.5_Liver

Enhancer Sequence

ACAGACAGAC AGACAGACAG ATAAATAGAT AGAAAGAATA GAAACGAAAC AAAACATACA 60
GTGATGGTTG TGTTTGGATT TGGTGATTAG GGATACAGGT GAATTTGAGT GACCAGTGCA 120
AGCTGGCAGT CATCCCTTCA TGCTTCAATC AGTCCCTTTG GGCAAGCAGT GCCTGTCGAT 180
CTCCTACATT AGTGTGGAAC ACAGGTAAAT CGGCTGATGT CTGGCTATCT CCAGCACAGG 240
GCAGTCAAGT AGCAAAGCAA ATGAGCAGGT TGAGAGGTGA TAAGCTGTTT ATCAAGGGTC 300
TTAATCGAGG AAGGCAAGAA AGGCAAGCCC CAGGGATTAT TGGGTAAGAT ATTGGAGAGG 360
CACCATCTGT GCCCATGAGT CACATTTCTC ACTTTAGAGA ATGAGTGGTT TTAGAAAGTA 420
TTCCAAGCGT TCAGAATTTA TCGCCTTAAT ATTTTAACCT TGTAAAGAGC AGAGGGCTAA 480
GTGATGGTAA TGTCTCCCCC TTCACACCAG AGGGATCTCA CTGGTGTGGA CTAAAGTGAA 540
TCATGAAGGG TTAATTGGCC ACAACAGGAG GCTGCAGATT CTAACAACAG TGGTTTTGTT 600
CTTCATAGCA GACCGACCCT TATTTCTTGG CTCTGTTTGT AGAGTCTGGA CAGCTGTCAG 660
GCCGGAACCT GTTTATCCCA TGTGTCTGTC TGTGCTGTGG AAAACTTGCT TAAAAGGAGG 720
ATTTATTTTT AAAGTGCTAT GCCCACGTTA CACGAGGGAG CTTGCTTGAA AATGGACACC 780
TTCATCTAAT CCAGTCAGGT GTCACATTCT GAGCACGAAA TATAGGGATT TGCATGCTTT 840
ATAGCCTCAA GTGGCTCTTG TTCAAGGTGT GGTTACAAAG CCCTGGCTGA AGTGACGGAG 900
GGAGGTGTTG GAGGGAACTC AGTGACAGCA CTTTCTGCGG TTTGTGGGGG TGACTGCTTG 960
TGAAAGTCGG ATTAGGCCCT GCCCACCCTG TGGATGTGGG AAAGGGAGAT AGTGACATGG 1020
GACTGAGATG GGTGAAGCAC GCAACAACCA TCAGTTGGAT CTGTGAGTGG GTGCTCTCCT 1080
CCCACTGCTG TGCACCAGCT CTTAGCCTGC TTTGTTCAGC CCACCTGTGT GTGGGCTCAG 1140
ACCAGTTCAC GTTAGTTGTC TTGTATACCA TTGACAGGTA AGGACCTGAT AAACCAAGAT 1200
CTCTTGAAAT TGTGCATTTT CAACCCCGAC ACAGAATCTT AGATATTGAA ATGCAGTTGT 1260
CATTAGTTTT TCTTGTAGCT TGGCGTGTAA GTCTGATTAC CTTTCTTGAC TCTTCTATGA 1320