EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-21499

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr5:122872680-122873320

Target genes

Number: 16
Name	Ensembl ID

Tctn1	ENSMUSG00000038593
Pptc7	ENSMUSG00000038582
Rad9b	ENSMUSG00000038569
Vps29	ENSMUSG00000029462
Gpn3	ENSMUSG00000029464
1500011H22Rik	ENSMUSG00000029463
Arpc3	ENSMUSG00000029465
Anapc7	ENSMUSG00000029466
Gm15846	ENSMUSG00000079906
Atp2a2	ENSMUSG00000029467
Ift81	ENSMUSG00000029469
P2rx4	ENSMUSG00000029470
Camkk2	ENSMUSG00000029471
Anapc5	ENSMUSG00000029472
Rnf34	ENSMUSG00000029474
Kdm2b	ENSMUSG00000029475

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA

MA0729.1

chr5:122873105-122873123

CCTTGACCTTCTTACCCT

6.21

Enhancer Sequence

ACAACCCGTG AGTTGGAGAG GCGGGGAGGT GGCGGTCCCG GGAGCCGGGG TTGGCGGTGG 60
CGGGGGGACG GTGTGGTCCC GCGGAGGGCT GCGCGGGATC CGGCCTCGGT GGCCTCGGAG 120
TTCTGGCTCC TTCCAGAACG ACGAAGTCCC CTGAGTCCCG GGGACCCAGT CCACCGAGTG 180
TCAGCCGTGG GGGTGCCACC CCAGCGGAGG GAGGGGACCC CACTTTCCGA GACTGAGAGC 240
ATCGGTGGCG GGCGCGGTGG CGCCTTTTTT TAATTTAAAA GGAACCCTGG CAGTCTAATG 300
TAAGGCCCGA CATTGCCGCC GGGGAGTGAC TGGTTTTGTG TGGTTGTGTT TACAAACAGG 360
GGTCTCCTGT AGCCCAGGCT AGCCTGCCCC AGGCTGTGTG TGTGTGTGTG TGTAGTCAAG 420
GAAGACCTTG ACCTTCTTAC CCTCCTGCCT ACGCCTCCCA GAAGCTGGGG GGGGGGGGTT 480
AACTGGTGTT TTACACCCCC ACCATGCTCT CAGTGTGCGT GTGGACCTTG GGGATCGAAC 540
CAGGGATTTC AGGCGTGCTA GGCAAAACAC TACCGATGGA GTGACAGTTC TATCTAGCCG 600
GGTTTACTGC GTCTCAAAGG AAGCCCGGGA CAGTTGTAGG 640