EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-21487

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr5:122499060-122499780

Target genes

Number: 15
Name	Ensembl ID

Atxn2	ENSMUSG00000042605
Sh2b3	ENSMUSG00000042594
Fam109a	ENSMUSG00000044134
Cux2	ENSMUSG00000072641
Myl2	ENSMUSG00000013936
Ccdc63	ENSMUSG00000043036
Ppp1cc	ENSMUSG00000004455
Tctn1	ENSMUSG00000038593
Pptc7	ENSMUSG00000038582
Rad9b	ENSMUSG00000038569
Vps29	ENSMUSG00000029462
Gpn3	ENSMUSG00000029464
1500011H22Rik	ENSMUSG00000029463
Arpc3	ENSMUSG00000029465
Atp2a2	ENSMUSG00000029467

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TCF4	MA0830.1	chr5:122499465-122499475	CGCACCTGCT	+	6.02
ZNF263	MA0528.1	chr5:122499350-122499371	GAAGGAGAGGGGAGCGAGGGG	+	6.06
ZNF263	MA0528.1	chr5:122499564-122499585	GGAGGAGCAGACAGAGAAGGG	+	6.1
ZNF263	MA0528.1	chr5:122499650-122499671	AGGGGAGGCGGGAGGGGGGGG	+	6.59
ZNF263	MA0528.1	chr5:122499612-122499633	GGAGGAGGGGAAGCGAGGGAA	+	7.07

Enhancer Sequence

AGCAAAATGC TCTCAGAGCG TGGTTATCCA CAAGGCTTCC CCGCCCAGGC CATCGCAGCA 60
CCTGCCGCGA CTCTGCTCGA CTGCAGGGTG CAGGGAGCCT CTGCGGGCGT AATGAGCACC 120
CAAGTGTGTC GCCAAATGGG GTACTGTAAC ACCGCATCTC CCCCCCTACC CCCCGCCCAT 180
CCCAGGGCCT CAGAAAGACG GTCAGCAAAC ATCCCAACCT GGAGGCACCT GGAGCCCGCG 240
CACCAGGAAC ATGGAAAAAG TGCTGGGGCT GCCAAGAGTG TCGCCCCTGA GAAGGAGAGG 300
GGAGCGAGGG GGGCCAAGGC AGAGAGAGCA GGGTGCGAGA GCAAGCGAGG TAGAACCGGT 360
AGCCCCAGGG GCGCGGGTGC AAAAGTTCCC AGGGGCTGCA GCCCGCGCAC CTGCTCCGCC 420
CCGCGGCAGG TGCGCAAAGT TGCGCGCGCT CGGGCCTGGG GCTCCGGGGC CGCGGGACTG 480
GGATGGAGGG GAAGGGGCGG GGAGGGAGGA GCAGACAGAG AAGGGGAATA TCAAGATGAT 540
GGAGAGAAAG CAGGAGGAGG GGAAGCGAGG GAAGAAAAGC AAGACCGGAG AGGGGAGGCG 600
GGAGGGGGGG GTCAAGACAG AGGTGGGAAG GACGGAGGCA GAAAGCAGGC GGAGGAAGAG 660
AAAGCAGGCG GAGGGGGTGA TAAAAAACCG AGGAGAGAGG GAGAAACAAG ACGCAGAGAC 720