EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-21473

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr5:122109710-122110300

Target genes

Number: 11
Name	Ensembl ID

SNORA42	ENSMUSG00000064841
U1	ENSMUSG00000077347
Naa25	ENSMUSG00000042719
Erp29	ENSMUSG00000029616
Aldh2	ENSMUSG00000029455
Acad12	ENSMUSG00000042647
Brap	ENSMUSG00000029458
Atxn2	ENSMUSG00000042605
Sh2b3	ENSMUSG00000042594
Fam109a	ENSMUSG00000044134
Cux2	ENSMUSG00000072641

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr5:122109726-122109741	AAGTTCAAGGACATC	+	6.5
RARA	MA0729.1	chr5:122109718-122109736	AGGGTCAGAAGTTCAAGG	+	7
Rarb	MA0857.1	chr5:122109717-122109733	GAGGGTCAGAAGTTCA	+	6.12

Enhancer Sequence

AAGGCAGGAG GGTCAGAAGT TCAAGGACAT CTGATTCCAA TACGTAGAGA ACATAGATTA 60
TCTTTTCTCC AATATATAGG GTTCTCAGTA TCTTGGGCTA CTCAAGACCT TGTCTCAGAA 120
CAACTCAAAA CCTCAAAACA ACTAAACAAT GGCCAGACGG TGGTAGGGCA GGGCTGTATC 180
CCACAACTCC AGAGGCTTAG GCAGGCAGAT CTCTGAGTTC GAGGACAGCC TGGTCTACAG 240
AGTGAGTTCT AGGACAGCTA GGCGTACTTG GAGCAACTCT GACTTGGAGA AGAAAACAAC 300
AAAAACAAAC AAAAAATAAA ACAAAACCAA ACACATCCAA ACCACAAAAC CAAATTTAAC 360
CATGACCTAT AGGCTTCCCA GCGTATCCCT GTCTCTTACA CAGCGTTTTG TATCACACAA 420
CCGAGTGGTT ATGCAATAAC TAGCTCAGGA TCGCACGAGT GCTGAAGCTT GTCCTGTCTG 480
GGGCTGTTTT CTGTGTCCGC AAAAATAATC ATCCCACGCA GCCCCGCAGT GCCCGGCTCT 540
CAGTGGATTA TCTGTGAAGT CATTGCGCTC CTAGCCAGCC CCTCGCCATA 590