EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-21200

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr5:108275980-108277430

Target genes

Number: 12
Name	Ensembl ID

Ephx4	ENSMUSG00000033805
1700028K03Rik	ENSMUSG00000089798
Rpap2	ENSMUSG00000033773
Glmn	ENSMUSG00000029276
Evi5	ENSMUSG00000011831
Rpl5	ENSMUSG00000058558
Snord21	ENSMUSG00000064453
SNORA66	ENSMUSG00000077222
Fam69a	ENSMUSG00000029270
Mtf2	ENSMUSG00000029267
Tmed5	ENSMUSG00000063406
Ccdc18	ENSMUSG00000056531

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Ar	MA0007.3	chr5:108276398-108276415	GAGTACAGTGTGTGCCC	+	6.13
Ar	MA0007.3	chr5:108276398-108276415	GAGTACAGTGTGTGCCC	-	6.19
CDX2	MA0465.1	chr5:108277288-108277299	AAGCAATAAAA	+	6.32
SOX10	MA0442.2	chr5:108276169-108276180	AAAACAAAGAC	+	6.14

Enhancer Sequence

GTATTCATTC ACCAAAAAAA TGTTAACATA TAAACCTGGG TCATGGATGA TATGTGGCCA 60
GCCTCTCCTG CTGTATGAAG AAGGATGTAA GGCAGGTGTG GTGGTACCTG TAACCCCAGC 120
ACTCAGGAGG CTAAAATATA AAGATTTCAA GTTCAAAACT TGAGCTACAT ACATAGCAAA 180
ATGCCTTTGA AAACAAAGAC ACAAATAAAA AAATCAGAAA TGTGAAAAAT AAGCGTGAAT 240
CATTACCACA TACAGTGAAA GGGGAAGCTA CCAGTTTTAA CTATGCATTT GTAGCCTGTG 300
TTTTCTACAG GTGGCCTGTA TTAGTTTTCA CGGACTGCCA TAACAAAGTA CCACAAAAAG 360
TCTTTTGTCT TGCAGTTGTA GATGGTAGAT GTCCAAACGG GGCCAGGATG AAGTTCAGGA 420
GTACAGTGTG TGCCCAGCAT ATGTGAGGCC TCCTTCCATC CCCAGCTTTG GGAGTGAGAG 480
GGTACAGAAA TTTAATGATT TGAATTAGTC CAAGGAAGAT ACTCTGGCTA AAGCCCAGCT 540
GAGGCGCCAG CATTAACTCC CAACCATGCA CGTGAACACA CTTCAAACCA TCCCGGGCAG 600
AAAGCCCAGA CTACAAGGCC AGCCAGTCTC CTCAGTGTTC TGTCTAAATC CCTGACTCAC 660
AGGAGATGCC CTCACACCTC AATGATTATA TCTAGTCACT GAGTATGACA GTGATTTGTC 720
ATACAACTCT AGTAACTGGA ACGGCATTAT GCTGTTAGTA AATTAAAATA TTAACAATGC 780
TTAAAGCAAA ACCAGAAAAC TAAGTTTTCA GGTAAAGGCT AATACGGAAC TTGATTTAAG 840
GAGACAGCAA ATTCAAATAC ATTAAAGGAG AAAATCTTTT TTACTTGCCT GAAGGTATGA 900
TAGGTACAAG AACCACATAC TAAAAAACCC AGGAATTAGA ATCTCAGACT CATTAAGATA 960
GTGTGGTGCT TTTAACAGGA ATGGTCACAT AGACTCATAT GTTCAAATTC TTGGCCCATG 1020
GGAGTGGTAC TATTAGGAGG TGTAGCCTTG CTGAAGGAAG TGTGTCACTG GGGAGGCGGG 1080
CTTTGAGGTC TCCAATGCTC AAGCTCCACC CACTATGGAA TCTAGCCTCC TCCTGGCTGC 1140
TTTCAGATCA AGACTTAGAA CTCTAAGCTC CTTCTCCAAT ACCATGTCTG TCTGCATGCT 1200
GTCATGCTTC CTGCCACGAT GATAATGGAC TGGAACTGTG AAATTGTAAG CCATCCCCAA 1260
TTAAATGTTT TCCTTTTTAA GAGCTGCCTT GGTCATGGTG TCTCTTCAAA GCAATAAAAC 1320
CCAAACTAAG ATAGGAAAAG CTTGGGCTGG AGAGATCGTT CAGCAGTTAA AAGCTCTGGC 1380
TGCTCTTCCA GAGGATTCAG GGTCAACCCC TAGCAAACAC ATGGAGGCTC ATAACTGTCT 1440
GTAACTCTAG 1450