EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-20629

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr5:31394000-31395630

Target genes

Number: 21
Name	Ensembl ID

4930471M23Rik	ENSMUSG00000029175
Cenpa	ENSMUSG00000029177
Dpysl5	ENSMUSG00000029168
Ost4	ENSMUSG00000038803
Emilin1	ENSMUSG00000029163
Preb	ENSMUSG00000045302
0610007C21Rik	ENSMUSG00000013622
Slc5a6	ENSMUSG00000006641
Cad	ENSMUSG00000013629
Slc30a3	ENSMUSG00000029151
Mpv17	ENSMUSG00000090262
Gtf3c2	ENSMUSG00000029144
Snx17	ENSMUSG00000029146
Eif2b4	ENSMUSG00000029145
Zfp513	ENSMUSG00000043059
Ppm1g	ENSMUSG00000029147
Nrbp1	ENSMUSG00000029148
Krtcap3	ENSMUSG00000029149
Ift172	ENSMUSG00000038564
Fndc4	ENSMUSG00000038552
Zfp512	ENSMUSG00000062761

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESRRB	MA0141.3	chr5:31394154-31394165	AATGACCTTGA	-	6.32
Esrrg	MA0643.1	chr5:31394155-31394165	ATGACCTTGA	-	6.02
RORA	MA0071.1	chr5:31394156-31394166	TGACCTTGAT	-	6.02
SMAD3	MA0795.1	chr5:31394195-31394205	TGTCTAGACG	-	6.02
TCF4	MA0830.1	chr5:31395150-31395160	CGCACCTGCT	+	6.02

Enhancer Sequence

AAGCCCTAGA AGCCACTCCT GACAGGTGGG ATTGTGATGT CAAGGTTTGC AGCTTGGCGT 60
TTAAGCAGGG TACTGGGTGA AGGGCTGAAG CAAAGGGCTC AAAGGATGGA AAGAACAGAA 120
CCCCTCATTG GCAGAGCAAA TATCTTCACG TTGAAATGAC CTTGATGGTG GATTGGGAGA 180
AAGAGGACAT AGAAGTGTCT AGACGCTCTG CCAGGCACTA TCATAGGAGG GTCAGGTAAA 240
CAGGCCGAGC CTCTGAAAAC CCTGCAGGGT TTGGTGACTA ATGGTCATAT GAAGGTGGAA 300
ATGGCCCAGG AGATCAGGAT GCAGTGTCAG GAGGCATGCT GGGCAGTCTG GGGGCTGTGG 360
TAAGTCACCT TCCTTGGGCT TGTAAGGTGA AACACAGCAA GCCATCAATG TAGCCGCCCA 420
TCAACAGGCT GCCTCCTTTT GTTCGGCATC AAGTGGGCAC TAAAGGGCCT CTCTGCTGGG 480
GTGTGGAGGT GTGACTATGT TTTGTCCAGG GCTAGCGGCC GTTTCTTTCC CTAGCTTTCT 540
GAAATTCCCC GACAAACAAG AAAACGATAT CTAGCGTGGG GGAAACAGTG AGGCCTGGGG 600
TATCCCTTGG GCGAGTAAGA GAGGTTGATG CCAAGTCAAA GGCTATGGGA ATAGATGCCT 660
GGGACACAGC TGGAGCCCCA CAAGCTGCCC ACAACTATAG TCGCCTGCAG CCCTTCTCTG 720
CTCCCCCATT CCCCACCCAC TCAGGTTTAA GGCCCCCTCC CAAGGAAATA ATCGGTGACA 780
CAGAAGACCA CATCAGAGAC AAAAGGAGAA GACTGGGGAG GGAGAATAGA AAGAATGGAA 840
GAACAGAAGG GAGGGGAAAA AAAGCCTGAG ACCCTGTCAA ATCTCAGAGA CAAACAGACA 900
GTCTCCTTCA AGACAAAATG GCCAGAGGAG GTGGCCAGGG AGGGCCTGTC GCGGTGGCCA 960
CCCGGAGATG GCAGGGCAGA CGGAGCCAGC GACGAGCGGC GGGCGGCGAG CGGCGGGAGG 1020
CCCGCGGGGT GCGGGGGAGG TTCTGCTGCC GCCCCCGGCC CGCTGTCCCG GCCGCTCCGC 1080
GCCTCATCTC ACACCTCGCC GCCCCCGGCC CCGTCTGTGC GGAGCCGGGA ATACCCCCCG 1140
CCGCCCATCC CGCACCTGCT CCTTCCTCGC CGCCCCCTCG CTCCTTGCGG CTGCCCGCTG 1200
AGCCCGGGCG GATCCCCAGG GCCGGGGCCC ACAACTGGCC GCTGCTGGAT GGGGCGCCCT 1260
GAAACCGGGG TGCGGAGAGA AGGGTCCGGG GCCTAAAGCT GGGATTCCAA TGCCCGGAGG 1320
CGAGGCGCAC GGAGCAATGC GGACATCGCC GCACCTGGCC CGCTCGGTCC GACGGAGCGG 1380
CGGAGGCGGC GCAGGGGTTA GGAGGCTGAG GGTGCCGCGG CAGGGGACTT GCTTTGCCCG 1440
GCCAGGAGAA CATGGGGTAT CGCGGCAGAG GCGGGGAGTG GGGCTGTCTG CGGCCGGCAG 1500
ATCTGCGTCG CGAAGTTGGG GGGCCGCGGG GAGCTGGGGA GGCGGGCCGG ACCCGCGCCA 1560
AGGGAGACAA CGAAATGGAC CGATGGCATC AGTCTGGCGC CCCCCGGGCT GAGGGCCAGC 1620
CCAGGTCTGT 1630