EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-20197

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:148594890-148595650

Target genes

Number: 19
Name	Ensembl ID

U6	ENSMUSG00000088625
Gm9506	ENSMUSG00000081086
Pex14	ENSMUSG00000028975
Cort	ENSMUSG00000028971
Apitd1	ENSMUSG00000073705
Rpsa	ENSMUSG00000080746
Pgd	ENSMUSG00000028961
Kif1b	ENSMUSG00000063077
1700121F15Rik	ENSMUSG00000085286
Gm13069	ENSMUSG00000085807
A930028C08Rik	ENSMUSG00000085819
Ube4b	ENSMUSG00000028960
Gm13097	ENSMUSG00000087198
Nmnat1	ENSMUSG00000028992
Lzic	ENSMUSG00000028990
Gm13071	ENSMUSG00000083811
Ctnnbip1	ENSMUSG00000028988
Gm13066	ENSMUSG00000086949
Clstn1	ENSMUSG00000039953

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6	MA0677.1	chr4:148595437-148595451	AAGCTCAAAGGTCA	+	6.55
RXRB	MA0855.1	chr4:148595437-148595451	AAGCTCAAAGGTCA	+	6.06
Rxra	MA0512.2	chr4:148595437-148595451	AAGCTCAAAGGTCA	+	6.04

Enhancer Sequence

ATAGGGGAGC TAGACACCAG GTAAGACGCC GATTAACACA GGCAGGGAGA GAGGAATAGT 60
CGGTTAACAG GATGCCCAGG TGCCAACAGG ACAGAATGCA CTGACAGAAT CATCACGGTA 120
AAAAGCAAAA GAGCAACAGG AACACAGGCT GCACGGTTCA GGCAAAGGGA TCGGGGCAGG 180
CTGAAGAGAT CTACAAGGAA AGACCCTCAG AATAAGGAAG GCAAAGAGCA TCCGTGAGTA 240
GACCATCTCA GGGAAATATC ACACGACACA TGTTTATGTT CTCAGTTCAC ACAGAGGATG 300
AGCACCCTGT CCTCCGGGAG CCACTCAGGA CAGAGATAAT AAAATAAGGC CTTAAGTGTC 360
TGAGTTCTCT TGTCTGTGTG CTGAAGCGGC TTGAGTGAGC TGTGTCTGCA CAGCCCACGT 420
CTGCAAACCC TAGTCCGCTA TCAGAGTGGA GTGGAAAAGG CTGACACCAG CAACACCATT 480
TCTGGGTTTC TTACATACCA ACACAGGGCA TTTACAGTAA AGAGTAACTC AAAAGTCTGA 540
AACCAGGAAG CTCAAAGGTC ACATTTCCTG GGACTGGGAG AGAAGGTGAA TGGTTAAAGG 600
CACTGGGTGC TCTTGAGGAA GGACCCAGAT TTGGTTCCCA GCACCCACAG AGTAGCTCAC 660
AACCATCTGT AAGTCCAGTT GTGGGATTCA GTTCCCTCTT CTGGCCTTGG TGGGTATCAG 720
GCATGCATAT GGCACACAGA CAGCATGCAG GCAGAGCACC 760