EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-19814

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:131816330-131817400

Target genes

Number: 22
Name	Ensembl ID

Srsf4	ENSMUSG00000028911
Epb4.1	ENSMUSG00000028906
Ythdf2	ENSMUSG00000040025
Rps15a	ENSMUSG00000083757
Gm13252	ENSMUSG00000084105
Gmeb1	ENSMUSG00000028901
Taf12	ENSMUSG00000028899
Snhg12	ENSMUSG00000086290
Snora16a	ENSMUSG00000065097
Snora44	ENSMUSG00000064604
Trnau1ap	ENSMUSG00000028898
Gm17300	ENSMUSG00000091021
Snora73b	ENSMUSG00000065353
Snora73a	ENSMUSG00000064387
Rcc1	ENSMUSG00000028896
Snhg3	ENSMUSG00000085241
Phactr4	ENSMUSG00000066043
Med18	ENSMUSG00000066042
Sesn2	ENSMUSG00000028893
Gm12999	ENSMUSG00000087352
Atpif1	ENSMUSG00000054428
Dnajc8	ENSMUSG00000054405

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ELF3	MA0640.1	chr4:131816423-131816436	CTACTTCCTGGTT	-	6.05
ELF5	MA0136.2	chr4:131816424-131816435	TACTTCCTGGT	-	6.02
ZIC3	MA0697.1	chr4:131817177-131817192	CCCCCCCCGCGGCGC	+	6.22
ZNF263	MA0528.1	chr4:131816805-131816826	TCCTCCTCCTCCTCCTCCTCT	-	10.23
ZNF263	MA0528.1	chr4:131816793-131816814	CCTTCCTCCTCCTCCTCCTCC	-	11.21
ZNF263	MA0528.1	chr4:131816796-131816817	TCCTCCTCCTCCTCCTCCTCC	-	12.34
ZNF263	MA0528.1	chr4:131816799-131816820	TCCTCCTCCTCCTCCTCCTCC	-	12.34
ZNF263	MA0528.1	chr4:131816802-131816823	TCCTCCTCCTCCTCCTCCTCC	-	12.34
ZNF263	MA0528.1	chr4:131816808-131816829	TCCTCCTCCTCCTCCTCTCCA	-	6.61
ZNF740	MA0753.2	chr4:131817062-131817075	CCACCCCCCCAAC	+	6.07

Enhancer Sequence

TTAGGCCCAA GCTCTTATGA AAACGTTCCA TAATACTAGC CAAGGAAAGG GGGCTGGGCA 60
GATGGCAAGA GTGTACAGAT GTGGAGAAAA CCCCTACTTC CTGGTTCTCC TAGAGTCAGT 120
AACAGGTCGC ATTTTGAGAG CTCAGGGTTT CCTTGCTCCT TGGACAGCCA GGTCAAGACC 180
CTCGGGTAAG ATTCTGCCCA CATTTCTCTT GCCTCTCAAA CCGAGGACAC CTGGCCAATT 240
CCCTGTCATT TCTGAAAGCA AGGGGTACCC TCTTCCCAGC AAGTACCTTC TCACTAACCC 300
CATAACCTTA GGCTTCCCTC GTCTCCTGAC GCAGGAAACC ACCCTACTCT CCACCTAGCC 360
ACCGGAGGCC CTCCACTCTG AAGCCCTCAC GGGGACCCTT CTCCTTCTTA CTGCCCTTCA 420
TCTTGGGAAG GACGCTGCCT CCTCTCCTAA GCCCTCCAAA GGACCTTCCT CCTCCTCCTC 480
CTCCTCCTCC TCCTCTCCAG GTCTGGTGGC CCAGGCCTCT CCCCTCGGGC GAAGGCTTGA 540
CCCTATTCCC TGCACCCCAC CCCCACCCCA GCACGCCGCC CTCTCCCCCG ACCCGGCCCG 600
ACCCAGGCCT GACCCAGCTC CTCCGCGCAA GGCCCAAGCT CCCAAACCCC GTATTTTTGG 660
GGTGGGGAGG GATTCCCCTG GCCCCTCCGC GAGGACTTCC GGGCCCCTCG GTCCGGGGGC 720
GCCGAGCCTT CCCCACCCCC CCAACCCCCG CCCAGTACGG GGTTCGTAGG ACCCGGAGCC 780
TAGGCCCGGC CGGCCACGCT GGGGGCGGCC CGGCGGCTCG GGCGGACCCA GCGGCAGCGT 840
CCCCCCACCC CCCCCGCGGC GCCGCGACGT CCGCTCGCTC CCCGGCGGCG GCGGCGGCAC 900
GCACAGGGCG TGGGGAGGCG CCCGCGGAGG CAGCAGCCCC CCGCCCCCTG CGCGCCCGCC 960
CGCCCTCGCC CTCGCCCTCG CCGTCGCCGT CGCCGGCCGC CGCGCGGCCC CCGCGCCCGC 1020
CCCCCCCCGC CCCCAGCCCT CGCCGCGCCG CGCGCCCACC CCTCCCCCTC 1070