EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-19811

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:131684540-131686010

Target genes

Number: 18
Name	Ensembl ID

Mecr	ENSMUSG00000028910
Srsf4	ENSMUSG00000028911
Gm13063	ENSMUSG00000084869
Epb4.1	ENSMUSG00000028906
Oprd1	ENSMUSG00000050511
Ythdf2	ENSMUSG00000040025
Rps15a	ENSMUSG00000083757
Taf12	ENSMUSG00000028899
Snora16a	ENSMUSG00000065097
Snora44	ENSMUSG00000064604
Trnau1ap	ENSMUSG00000028898
Gm17300	ENSMUSG00000091021
Snora73b	ENSMUSG00000065353
Snora73a	ENSMUSG00000064387
Rcc1	ENSMUSG00000028896
Snhg3	ENSMUSG00000085241
Phactr4	ENSMUSG00000066043
Med18	ENSMUSG00000066042

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3	MA0135.1	chr4:131685289-131685302	AAATTAATTAGCT	+	6.15
Nr5a2	MA0505.1	chr4:131684787-131684802	GCTGGCCTTGAACTC	-	8.25
Sox3	MA0514.1	chr4:131685039-131685049	CCTTTGTTTT	+	6.02

Enhancer Sequence

GGATATGTTG TCGCTGCCTG AAAAAGGATT TTACCCTGTA ACCCAGGTTA CCCTTGACCT 60
TGTAGTCCTC CAGAGTTCTG TGACACAGGC CTGTGCACAC AGACTATTAA CGCTGACAGG 120
AAAGCGAGCT GGCTGCGTGT CTCATATGCA GACTGTTTGG TTTGGTTTAG TGTGGTTTGC 180
CTTAGTTCTT CGAGACAGGC TTTCTCTGTG TAGCTCTGGC TGTCCTGGAA TTCACTCTGT 240
AGAGCAGGCT GGCCTTGAAC TCAGAGATCC ACCTGCCTCA GCTGGGATTA AAGGTGGGCA 300
GCACCACGGT CCAGACACTT GTGGACGGGC TTACATGCTG GGGACACACA AGTCATTCTC 360
CACTGAACCA GCAAAGCCAC AGGAACATCA CTATCCCCTT TTTACAGGTG GAGAAGGCTG 420
AGGGGTGGAG AGGTGAAGCT GACTAGCAGG CCTTAAGTTA GGTCTCCAGT TCCTGGGATT 480
CTAAAATTCA AGTTCAATCC CTTTGTTTTA CAAATGAAGG CTCTGAGGCT GTGCTATAGC 540
AGTGACCCCA GAGGCTGGGT GCACAGAGAG GGAACAGAGA TGAGTCAACA AAGCCTGCAC 600
CAGCAGCCCA GGGGTCCAGC TGGAGCTCCC TTTATTTGCA GACAAAGGGT GATTGCTCTC 660
CCAAAGGACA AAACAAGCCT GGTCGGGCAA GGAGGACGAC AGCAAACTGT GTCCCTGCCC 720
ACCACTTAAG AGGGATGGCA CTTGGCCAGA AATTAATTAG CTGTCTCAGT TTGGCAGAAC 780
CCGGAGAAGG AAAGTGGTTA ATTATAATGA AGCCCAGAGA GCTTGCTTAT CAAGGGGAAG 840
ATTATGGCCA GGCCTCGGAA GCAAAAGGCC CCCCCGAGTT GAACGTGAGT GGAGAGACCT 900
GCCAGGCTAT AGTTAGCAGC AACCAGGCTA AAGGCCTAGC TTCCATTGGA AACCCAAAGC 960
ACACTCAAAG AGTTCTCCCT TCCCTCATCC TGACCCTGCT TAAGGATGGC TGGAGTGTGG 1020
GGTGAACTGT ATCCAGATAG TGTGGAAGAA TCTGGGGCTG GAGATCTGAT GGCTCACTTA 1080
GGAAAGTGTT TTCTGTGTGA GCATGGGGAC CTGAGTTCAG TCCCCAGGAG TCACAGAAAC 1140
AAGACAGGTG TGGTGGGCTG AGGAGGCAAG ACAGACATTT GCTGGGACAT GCTGGCTGGG 1200
TACACAGCTT CCAGTGAGAG ATCCTATCTC AAAAAAACAA GGTGGTTGGT TCTAGAGGCA 1260
CGACACCCTG AGGCTGATAC TAGGTGTGTG TGTGTGTGTG TGTGTGTGTC TGTGTGTGTG 1320
TGTGTGTGTG TCTGTGTGTG TCTGTGTGTG TGTGTGTGTG TGTATGTCTG TGTCTGTGTG 1380
TCTGTGTGTT TCTCTGTGTG TGTATGTCTG TATATCTGTG TGTCTGTGTG TATGTGTGTG 1440
TGTGTATATG TCTGTGTCTG TGTGTCTGTG 1470