EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-19785

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:130066280-130066790

Target genes

Number: 13
Name	Ensembl ID

Ptp4a2	ENSMUSG00000028788
Pef1	ENSMUSG00000028779
Serinc2	ENSMUSG00000023232
Fabp3	ENSMUSG00000028773
Gm10570	ENSMUSG00000073752
Zcchc17	ENSMUSG00000028772
Snrnp40	ENSMUSG00000074088
Nkain1	ENSMUSG00000078532
Pum1	ENSMUSG00000028580
Gm12971	ENSMUSG00000087449
Gm17328	ENSMUSG00000091343
Sdc3	ENSMUSG00000025743
Gm12970	ENSMUSG00000087451

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA

MA0729.1

chr4:130066525-130066543

GGGGTCTTAAGTTCAATT

6.41

Enhancer Sequence

CCAAACTGAA AGTCTTTTTC TGCAGCTGGG GTCTCACTAT GTAGTCTTAG CTGATGCTCA 60
CTATCTGTCC ATGCTGGCCT CACTTGAGTA ATCCTCCTAC CTCAGCCTCC CAAATCCTAG 120
GCTCTTCAGA TGTGAACCCA ACACTTAAAC CACAGGAGGG GACCTCAGGG AGAGTCAGTT 180
TATTAAGAAT GAGCCTGGGG GCTGGAGAGA TGGCTCAGCG GTTAAGAGCA CTGACTGCTC 240
TCCCAGGGGT CTTAAGTTCA ATTCCCAGCA ACCACATGGT GGCACAACCA TCTGTAATGA 300
GATCTTTTCT GGTGCGTCTG AAGAAAAAAA AAAAAAAAAG AATGAGCCTG GAGGTTGGAG 360
ATACGGTTCA GTGATTAAAA GCCCTGGCAG CTCTTCCAGA GGTCTTCCAA AGGCCATCTC 420
GCCAGCCCCA CCATAGTCTC TTGACACAGG GCCCTAGAGC CCCGAGGATT CCCCCAGCCT 480
TCATTGTCTC CTCTCGATCT TTCTCTCTCA 510