EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-19770

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:129732730-129733230

Target genes

Number: 20
Name	Ensembl ID

Marcksl1	ENSMUSG00000047945
Eif3i	ENSMUSG00000028798
2510006D16Rik	ENSMUSG00000028797
Dcdc2b	ENSMUSG00000078552
Iqcc	ENSMUSG00000040795
Gm12965	ENSMUSG00000086797
Txlna	ENSMUSG00000053841
Kpna6	ENSMUSG00000003731
Khdrbs1	ENSMUSG00000028790
Ptp4a2	ENSMUSG00000028788
Gm10571	ENSMUSG00000073753
Gm12966	ENSMUSG00000070729
1700003M07Rik	ENSMUSG00000085389
Bai2	ENSMUSG00000028782
Gm12963	ENSMUSG00000085517
Col16a1	ENSMUSG00000040690
Pef1	ENSMUSG00000028779
Nkain1	ENSMUSG00000078532
Pum1	ENSMUSG00000028580
Sdc3	ENSMUSG00000025743

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr4:129733012-129733027	TGTGGCCTTGAGCTT	-	6.12
ZNF740	MA0753.2	chr4:129732773-129732786	GTGGGGGGGGGGC	-	6.29

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_05952

chr4:129732255-129734031

E14.5_Limb

Enhancer Sequence

TAATGAGGTG AGCCTTTTGT CTGCACGGGA CTCTAGGATT CTGGTGGGGG GGGGGCATCA 60
GTACTCCCTC CTTGGATAAA GAAAGGTTTG AGGCTTGGAG CCTAAGGTGT GGGGGTGATG 120
GATAACGGAA ACACCCAACA TTCCAGAGGG CCCAACTCTA GGCCTTGATT GCCCTGGATT 180
GTAGGGTGGA AGTCCAGGAA GTCACTCCTG CTGAGTTGGA GGCCATGGGT ATCATGGGGA 240
AAATATGTCT TAGCTGCGAA ACCCTTCTTC CCTGACACAC TGTGTGGCCT TGAGCTTGTT 300
ACTGTTTTAC TGTTTCTGTC TCGGCTTTCT TTTGTTCCTT TTAAAGAGGT GCTCTTTGTA 360
CCTTGAGAGG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG 420
CGCACGCGCG ATGCACACTT GTGCTGGGTA GGGCTAATCT CAGAGGCCCA GAATTGACCT 480
GCAGGCCTGT TCTTGCTTTT 500