EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-19761

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:129642460-129645680

Target genes

Number: 20
Name	Ensembl ID

Marcksl1	ENSMUSG00000047945
Lck	ENSMUSG00000000409
Eif3i	ENSMUSG00000028798
2510006D16Rik	ENSMUSG00000028797
Iqcc	ENSMUSG00000040795
Gm12965	ENSMUSG00000086797
Txlna	ENSMUSG00000053841
Kpna6	ENSMUSG00000003731
Tmem39b	ENSMUSG00000053730
Khdrbs1	ENSMUSG00000028790
Ptp4a2	ENSMUSG00000028788
Gm10571	ENSMUSG00000073753
Gm12966	ENSMUSG00000070729
1700003M07Rik	ENSMUSG00000085389
Bai2	ENSMUSG00000028782
Gm12963	ENSMUSG00000085517
Col16a1	ENSMUSG00000040690
Pef1	ENSMUSG00000028779
Pum1	ENSMUSG00000028580
Sdc3	ENSMUSG00000025743

TF binding sites/motifs

Number: 13

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6B	MA0731.1	chr4:129642621-129642638	TGCTTTCCATGAATTAA	+	7.32
LEF1	MA0768.1	chr4:129643017-129643032	AACCCTTTGATCCTG	-	6.04
POU2F2	MA0507.1	chr4:129643737-129643750	TTATGCAAATGTA	-	6.18
POU3F1	MA0786.1	chr4:129643737-129643749	TTATGCAAATGT	+	6.14
RFX1	MA0509.2	chr4:129644812-129644828	TGTTGCCGTGGCAACC	+	6.12
RFX1	MA0509.2	chr4:129644812-129644828	TGTTGCCGTGGCAACC	-	6.12
RFX2	MA0600.2	chr4:129644812-129644828	TGTTGCCGTGGCAACC	+	6.19
RFX2	MA0600.2	chr4:129644812-129644828	TGTTGCCGTGGCAACC	-	6.2
RFX3	MA0798.1	chr4:129644812-129644828	TGTTGCCGTGGCAACC	-	6.03
RFX3	MA0798.1	chr4:129644812-129644828	TGTTGCCGTGGCAACC	+	6.38
RFX4	MA0799.1	chr4:129644812-129644828	TGTTGCCGTGGCAACC	+	6.45
RFX5	MA0510.2	chr4:129644812-129644828	TGTTGCCGTGGCAACC	-	6.67
RFX5	MA0510.2	chr4:129644812-129644828	TGTTGCCGTGGCAACC	+	6.81

Enhancer Sequence

GGATGAGCGG AAGGGATATC TCAGACTCTC CTTCTTCCTC AGTTTCTTGA GATGCAAGAG 60
GAGGGGCCAC TTCTGCAGCT GGAGGGAAAA GCACCAAATC CCAGGGCGGT GGATAATAAT 120
AGCTGCCGAG ATGCGCTCTC CCGTACGTAC GCGGTTCTAA GTGCTTTCCA TGAATTAACT 180
GAGTACATCG GTGCAGCAAC CCACAGAGGC AGCTACTATT ATTAACCCCG TTTGTGGTCA 240
CGGGGAGGTT AAGTAACTTG GCCAAGGTCA AACAGCTTGT CAGAGCCATC CCAAGTGTTT 300
AAAGCATTCC AAAGGAGGCA GCTCGCCTTC CAGCTCCTCC CCTATCCTGC AGCTCCTGGG 360
GCCTTCTGTG TATGCCCTCA GACACCTCTG CATTTCAGTT CATTGCTAGT CCCATTCCTC 420
CCAAGTAGCT CCTCTTTGAG GTGAGGAGAT GACCCCACAG GCTCTATTGG CTGGCTTCTG 480
GTAGTTTGGA GGGCAGAAAT CTGGGGTCCC AGGTTGAGGT TCAGGGTATT CAAAAGGGCT 540
GGAGTCCCAG GTAACACAAC CCTTTGATCC TGTGGACCCA TGAAACCGTT AACTCTAGCA 600
GAAAAAGGCT GAGAAGTGGA GGCATCTAAA GTAGAGGACC CAGGGATATC TGTTGCTTGG 660
GGTCTTAGAG TCCTGGAGGT GGTTCGTAAG TGACTGGTCC AGCCAGGCAG TGGTGGTACA 720
TGCCTTTAAT CCCAGCACTT GGGAGGCAGA GGCAGGCAGA TTTCTGAGTT CGAGGCCAGC 780
TTGGTCTATA GAGTGAGTTT CAGGACAGCC AGGGCTACAC AGAGAAACCC TGTCTTGAAA 840
AAAACCAAAC CAACCAACCA ACCAAACAAA AATGTGCCTG GATCAGAGTG TAACCAGAGA 900
GTCAACCATG CCGCAGGGGT TGGTGAAGAG GGGCAGGAAG CGCGCCTGAG TACTCCCTCT 960
CAGCCCAGAC CTTGCCAACT TCAAGCTACT TGTACCCAGG AAAACACTTT GGGCCCAGTT 1020
CCATGCTGAA AGCCACGGTG GGTCTCTAAA GGATGACTTA GTTCCTAATC TTGTCACCTC 1080
TCTCACTTCT TTCCTACTGC TCCTGCCCCA GGGGTTAGGG AGGAAGTACG GTTCCCAGGG 1140
GGAAACCCCT CAGTGTCCAC CGGCGTCCCG CTGCCTCCGC TTCTAAGGGC CCCAGGATTC 1200
CTGCTCCGTC TCCAGAGGCT TTTTCACACA ATTACCCAGG CCAGGAATTT CGATCCCTGG 1260
TGCCAGCGCT GCCCTTGTTA TGCAAATGTA GGCAAATGAG ATGCAAACAG AGCAGTCCCA 1320
GATTAACAGA GAAATCCCCA GCAGCTGGAG GAGTCACCAC AAAGTCAGCT TGCTCTAGCG 1380
TCCCTATTAC CCCCTTGTCA GGCTTCACCC ACCTGGATCC GCCAGGGCCA CCACCCTATC 1440
CTTCTCCCCT CTAAACCAGT GGTCCTCAAC CTTCCTAGTG CTGCGACCCT TTAATTTAAC 1500
TCCTCATGTT GTGACCCCAA CCATAAAATC ATTTCATTGC AACGTCATAA CTGTCATTTT 1560
GCTACTGTTA TGAATCGCAA TATAAACACC TGTGCATTCT GATGGTTTTA GGTGACCCCT 1620
TGTAAAAGGG TCAGTCGATC TCCAAAAGGG GTCCCAACCC ACAAGCTGAG AACTGTTGCA 1680
CTAAAAGCTG TCTTTTCAGA CATAGGAAGG GCCTCCACCC TTCCAGCCTC TCTCCCTACA 1740
TTTACCAGAT CATAGTAGAA ATGGAAGTTA GTAACAGTGT CTCCCAATTT TGTTCATGTA 1800
GAAGAGGGGA TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC 1860
TCTCTCTCTC TCTCTCTCTC TCTCACACAC ACACACACAC ACACACACAG GATAGAAGAG 1920
TCCCTGCTAA GTTCACACAA ATACACTCAT TCAGACCCAA TTACACACAG CCTTGCCCAC 1980
TGTACTGTAT AAATCAGTCC AAGCCTTTGC CTTTTCCCTC CCCTGACACG CTATAAATTA 2040
AGCCACTGTC ATTCACAGGC TACAGTGCAG TGGGTCATCT GCCTGTGTTC TCTCTCTGGG 2100
ACTACAGGAT GAAAGATACT CCTGATAGAA GGCCACTAGG CATGATGAAG ACCGGTAAGC 2160
AAAGGACCCT TCCCCTGGGC ATGACCCTGG AGAAGGAGCC CAGTGTGGGT AGTGCCTACC 2220
AGAGCCCCTT GGAGGTTCTG GCTAGTGTCT GTGCCTGTGG GAACCTGGCC CCTGGCAGGC 2280
CCAACCAGTC CAGGCCCAAC TTCTAAAAAT AAGAGCCGAG GAGCAAAGCC TCTGGTTGGT 2340
TCTGTGGGAG CCTGTTGCCG TGGCAACCCT TCTCAGAGGC CTCCCTCCTG GCTGGGCTGC 2400
CCCGTTTGGC TTCAGGTCTC CGTGCCAGTC CCCCTGTGCT GGCCCCTCTG CCAACCAACT 2460
CTCTGTCCTG TCTTCCTTGG TGGGGGGAGC AGGTGTGGGG TGGGGGGCGT GGGGGTGGCG 2520
CAAGCGGGAG GACCTTGGGA ACCCCGACAG AGCACAATGG CCTGTGTGTG AGGCCCAGGC 2580
TGGATCTGCT TGTGTGGAGT CTGTGTGACA GTGGGGTGTG TGACTGTGTG TGGCCTCTGT 2640
TTGAGCTGTT CCCCGGGTGT GCATCAAAGC CTGTGACTCG ACTGTCAGAG TCCCCGTGGA 2700
TGACTGTGCT TTGTCTCTGA ATCTGCACCC ATGTGTGACT GGATGTGTCT GTGTGTTGAG 2760
GGAAAAAGGT GGCTATGGCT TCCTGGGAAT GTCCCTACCC AGTCCCTGGA CTTATAGGCG 2820
GGCAGTATAG AGGAGAAGGT AGCTCAGAGG AGCCAGGATT AGGCCAGGGG TCAGCAGGGC 2880
ATGGCAGGGT TAATGTCTCC TAGGACCTGC TATCAAATAG TACCTAAACT CCAAGTCTTC 2940
TCCACGTGGG AGCAGGAGCA CTGGAGGGGG AATATCCAAG GGTAAAAACT AAGCCCAGGA 3000
GTTCACGAAT GCACATGTGC ATTTGTGTGT GTGTGTGTGT GTGTGTCTGT CTGTCTGTCT 3060
GCGAAATGTG TGCTACCGTC GCTGCCAGTG GTATAGCTCC TCTCCCCCAG CCCACCTCTC 3120
CTCTCCAATC AATCAACAAG TCTCCCCTCC CCCAACCCAC CTCTCTTTCT CAATCAATCA 3180
TCAAGTCTTG TCAAATCTGC GGCAATCACC CTTCCAGCAG 3220