EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-19747

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:129307790-129308520

Target genes

Number: 19
Name	Ensembl ID

Rbbp4	ENSMUSG00000057236
Marcksl1	ENSMUSG00000047945
Hdac1	ENSMUSG00000028800
Lck	ENSMUSG00000000409
Eif3i	ENSMUSG00000028798
2510006D16Rik	ENSMUSG00000028797
Dcdc2b	ENSMUSG00000078552
Iqcc	ENSMUSG00000040795
Gm12965	ENSMUSG00000086797
Ccdc28b	ENSMUSG00000028795
Txlna	ENSMUSG00000053841
Kpna6	ENSMUSG00000003731
Tmem39b	ENSMUSG00000053730
Khdrbs1	ENSMUSG00000028790
Gm12966	ENSMUSG00000070729
Bai2	ENSMUSG00000028782
Pef1	ENSMUSG00000028779
Serinc2	ENSMUSG00000023232
Snrnp40	ENSMUSG00000074088

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2

MA0505.1

chr4:129308132-129308147

AAGTTCAAGGCCACC

7.55

Enhancer Sequence

GGAAGACGTC AGCATGTGGA GACACTGGTC TCATACAAAA ACAAAACAAA ACAAAACAAA 60
ACAAAACGAA GCATACACTG ATAGGGCTGA AGGGACGGCC AGAGGTTAAG ATCACTGGCT 120
GATCTTCCAG AGGACCTGGG TTCAATTCCC AGCACCTACA TGGAGACCAC AACTGTCTGG 180
AACTATTCTA ACCTCTAAAG GTACCAGGAA CACAAGTGGG GAAAAATATA CATCCATGCA 240
AAACACTCAT ATGCATATCA ATACAGCAAA ATAAAAGTAG ACAGAATTGA GCTAGACCTG 300
GTAGCTAACG CCTCATGCAT CTGGGAGTCA GAGGACTGTC ACAAGTTCAA GGCCACCAGA 360
GAGCCTGGTC TACAAGGTAA GTTCTGGGTT AGTTGTAGCC ACAGCTAAAC TCAGAGACCT 420
GTTCTTCAAA GAACAACAAA AATGCCTGGC ATGATGGCAC ATGCCTACAT TTAATCCCAT 480
TACTTAGGAG GCTAAGACAG GCAAATCTCT GTGTTCCAGG CCAGCCTGGT GTACAAAGCA 540
AGTTTCAGGA CAGCCAGGGC TACACAGAGA AACTTTGTCT TTGGGGAAAC AAAACACACA 600
TAAATAAAAG ACTTGGCCGA CACCAACAGG CCAGCTGGCA CAAAGCCAGG CTATGACAGT 660
CCTGTCTCCA CTGCCCTGCA GATGGGCCCT TGTGAAAGCA TCCTGGAAAC TGCAGGTCAG 720
GTTCCCGTCT 730