EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-19727

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:128865350-128866610

Target genes

Number: 18
Name	Ensembl ID

Ak2	ENSMUSG00000028792
1700086P04Rik	ENSMUSG00000085085
Hpca	ENSMUSG00000028785
S100pbp	ENSMUSG00000040928
Yars	ENSMUSG00000028811
C77080	ENSMUSG00000050390
Sync	ENSMUSG00000001333
Gm17525	ENSMUSG00000091673
Rbbp4	ENSMUSG00000057236
Zbtb8os	ENSMUSG00000057572
Zbtb8a	ENSMUSG00000028807
Bsdc1	ENSMUSG00000040859
Marcksl1	ENSMUSG00000047945
Lck	ENSMUSG00000000409
Iqcc	ENSMUSG00000040795
Gm12965	ENSMUSG00000086797
Txlna	ENSMUSG00000053841
Khdrbs1	ENSMUSG00000028790

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2C	MA0497.1	chr4:128865398-128865413	ATCTATTTTTATCTT	-	6.32
SCRT1	MA0743.1	chr4:128865896-128865911	AAGCAACAGGTTTCT	+	6.24
SCRT2	MA0744.1	chr4:128865896-128865909	AAGCAACAGGTTT	+	6.03
ZNF740	MA0753.2	chr4:128865961-128865974	GTGGGGGGGGGAG	-	6.52

Enhancer Sequence

TCTCTGTTCT CTAACCTCCT GGTTGCAACC TCAGAAACTG GTTCCCCCAT CTATTTTTAT 60
CTTACCTCAA AAAACCTATT GCCTATTGGC TTCGTGCACA AAGCCTCATT CTATTCAGGA 120
CAGTAAAACG CCAATGCCAA ATGTATACTA CACATCCTAC CTAGTTCAGG ACTCTAAAAC 180
CAAAACCACT ACCCAACTGG GTCTGATATG CAGGACCAAA AGCAAGGATT TTGCAAAAGG 240
GGGTGGAGGG GTACTCCTCA TTGGCCTTTG ATTTCCAACC TCTCCTAAAC AAAATACACT 300
ACCCGTGAAG CAGACAGCAT CCACCAAAAA AGGGTGTATC ATCAAAATGA GCCCCTCCCA 360
AAATTTTTTT TTTTAACAAA GGGAACTGAC TATCTGAAAG AATTTGCAAC TCCCTCTGGG 420
CTAACTGCAA ACAAGGTAAA ATGGAAAGAT AACCGGTCTG GAAATCTCTG CTTTAGGTAA 480
CAATTCCCCC AGACTAGGGA GCCAAGAATT CCCACACAGG CCCAGGCAGC AGATTTTTCT 540
AAACTGAAGC AACAGGTTTC TTTTACAAGA ATAGTCTATT AAAGCCTGGG GCTCTTAACA 600
ACCACGGGGG GGTGGGGGGG GGAGGACAAA AAACAAAAAA TGAGGGCAGC CGGTGAACTC 660
CGTCCTCATT TGGTGGCCCT CTGAAGAAGG GCTCACCTTA GGTGTCTGCA GCATTCCCTG 720
CGGCCCTGGA TGAAACCCAG CAACGGTGGC CCAGGGATAC CTTGCGAGGA TGCCCGCGGG 780
CCTCCCCGTC GGGAACACTA CCCGCCCGCC CGCCGCGCCC AGGGCCTCTG CACTTCCCTC 840
CTCCTCCCAC TCGGGAGAGC GAGTCCTCGC CTCCCCGCGG ATAGCGGGAG GAGCGCGTGT 900
TCCCTCCGCG CCCCTCCCCC CAGGGGCGAC CCAGGTCCCC CCGCGGGCTC CGCCAGGGCA 960
CCCGACCTCA GGGGACAGAC GCTGACTGCC ACATCTCGGC AGGCTGCGGC CCGCGGTCGC 1020
CCGGAGTGGG TCGCCCTCTC CCGCCACGAC GCCCCGCGGG AAGCCCGCCA TCCCCGCTCT 1080
CCCTAGCAAC AGCCTCCCGC GGGGAAGGCA GGCACCGGGA GAGGAAGACC CCCCCCCCCG 1140
CCCCCACTGG CAGGGCCGGC GGCCCGAGGA CCTGACAGCT CCCTTTTCCT CAGCGGGATG 1200
AGGGGCGTCA CTCGCCCACG GATGTGGAGG TGGGGGGCAG GGACAACCTC CCCGCCCGCC 1260