EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-19684

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:126500980-126501450

Target genes

Number: 18
Name	Ensembl ID

Eif2c1	ENSMUSG00000041530
Gm12935	ENSMUSG00000083461
Clspn	ENSMUSG00000042489
Gm12936	ENSMUSG00000081319
5730409E04Rik	ENSMUSG00000073755
Psmb2	ENSMUSG00000028837
Ncdn	ENSMUSG00000028833
AU040320	ENSMUSG00000028830
SNORA17	ENSMUSG00000077780
Zmym4	ENSMUSG00000042446
Sfpq	ENSMUSG00000028820
Gm12940	ENSMUSG00000085334
Gm12941	ENSMUSG00000084088
Gm12944	ENSMUSG00000084149
Zmym1	ENSMUSG00000043872
Zmym6	ENSMUSG00000042408
U6	ENSMUSG00000088982
Gm12942	ENSMUSG00000070737

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1	MA0154.3	chr4:126501304-126501318	AGTCCCTTGGGAAT	+	6.84
EBF1	MA0154.3	chr4:126501304-126501318	AGTCCCTTGGGAAT	-	8.12

Enhancer Sequence

CCAAGGTGAA TCTGTCTTCT ATCACTTGTG GGACCAGGGG AGAGGAGGTG GTTTTTCTGA 60
AACAGAGAAT ACCGAGTTTC CTGTTCACAC TGAAGTTGGG AACAGTCTTT CAGTTGTGAA 120
GCCTTCAGAA AGTCACCATG GCGGACAGCC AGTGTTTGTT TAGCATATAA TTCTCAAATT 180
TTCATTGCTG GTGAGAAGAC TGTACCAGTA TGGTAGTGAT GGCTGAAAAT ATACACTCAA 240
CAGCTCTGTG AGGTGGCACA CGCACTTCAG AGTTCCAGAG ATGATCGAGG TTATTTGTGG 300
CCACATGACT TTATCTGCTG GTGTAGTCCC TTGGGAATTC AGGGGAATTC ATAGTAGTTA 360
TGAGCAATAA GTGTCGGTGT CCTTTGGCCC AGCACTTCCT GCATCCAGTG GTAGGTCATT 420
GCTTGATGTA GCAGCCAGTC AGGATTACCC ATGAATTATC ATAGTCTCTC 470