EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-19665

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:125914520-125915760

Target genes

Number: 18
Name	Ensembl ID

Mrps15	ENSMUSG00000028861
Oscp1	ENSMUSG00000042616
Lsm10	ENSMUSG00000050188
Stk40	ENSMUSG00000042608
Fam176b	ENSMUSG00000050212
Thrap3	ENSMUSG00000043962
Mtap7d1	ENSMUSG00000028849
Trappc3	ENSMUSG00000028847
Adprhl2	ENSMUSG00000042558
Gm12945	ENSMUSG00000087394
Tekt2	ENSMUSG00000028845
Eif2c3	ENSMUSG00000028842
Eif2c1	ENSMUSG00000041530
Gm12928	ENSMUSG00000082381
Gm12935	ENSMUSG00000083461
Gm12934	ENSMUSG00000082888
Clspn	ENSMUSG00000042489
Psmb2	ENSMUSG00000028837

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PAX5	MA0014.3	chr4:125914645-125914657	GGGGTCACGCTT	-	6.74
ZNF143	MA0088.2	chr4:125915253-125915269	CGGGGCATGGTGGGAA	-	6.66

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_04048	chr4:125913674-125916969	Cortex
mSE_05014	chr4:125913750-125916657	E14.5_Heart
mSE_06665	chr4:125913808-125916768	Heart

Enhancer Sequence

ATCTGGGGGA CAACATCAGA CAGAGCAGGT CAACACAAGA GGCACAGATG GTGGAGACGA 60
GGCACTGAAC CCACGATGAG CCCAAGGACT CTCAAGAGGA CTGTTACCCC CACCCCAAGT 120
CACGCGGGGT CACGCTTATT TTTTCCTAAG ATCTGGTGCT CCTTTTGCAG ACACAGGCAA 180
CAACACACTG AGCGAGGGAC TGGGAATATA TCTCAGAGGT AGAGCGCTTG GCTGTCATGC 240
AAGAGGCCCT AGGTTCAATT CCCAACACCA GAGAAGAAAA AAATAAACCT CCCTAGGCCA 300
ACACCCTGCA TCCACTTTAA GAGTGCCTCC TACCAGTCTC CCCAGATGAG AGGGCTCAAA 360
ACTGAGAGCA AAGGAAGGAG CCATAATAGG ATCTAGGGAA GACCCAACTG CCCTCTCCCA 420
GGTCCCACAG TAGGGCCTGC CTCTCCTGTT TTCATCATGC TGGCCTGCGG GAGGCATGCT 480
TCTTAGATTT GGGGCAGTGA GGGTCCTTGT GCTCCTCCAA CCAGCCGTTA GGAGTGTGAG 540
ACAGAGGCAG CTAGAGGGCC TGGTTGCCCT AGGCCACCCC ACTCTGTCCC TTCAGCTGCT 600
GGGTTATTTT TAAGCTTCAG TCAGGTGGGG TTGGTACAGC AGCTGATTTG GTTGCTAGGC 660
AACAGAGCAA CCAAATAAAA GCTGGAGAAA CTTTATAAAT AACTTTAACC ATGGTTCTTT 720
CATATGTAAG CACCGGGGCA TGGTGGGAAC GCAGGAGCTG TGCCACCTTG GTTGGTCCCA 780
ACTTTGGACC CAGCCAAGGC CAAAGCAGGT GCTCTAAAGG CAGAGATGGC AGGGTTGCAC 840
GGCCCTCCAG GGTGGAGCCA GAATACCCTC ACCCTGTATC CAGGCTAGCC TGACAGATGG 900
GGGCAAAGCC ACCTGTCTAA GGTTGGCCCA GGCCAGCTAG CTGTGGTTAG AGAGAAAGCT 960
GGTTGCCTGT TACCACCCCA GTCCCTAGCC TAACCTCTTG AGGCCCCTGC CAGGCTTTCT 1020
GTCCTCTAGG CCATTGTCCT TTGTTTCTCC TACAGGACAC TGCTATGTCC TGGGAGGGTC 1080
CAGACCCAAA TGCTGGCTCC CCTAAAGGGC ACAGAGCCCT GGGTGGAATA GAGCAGGGCT 1140
GGACCTGGAG TCATAGGGAG AGCTCCAGGG ATGAGTATTC TTGCTGAGCT CTCGGGGGGC 1200
TGGCTATAAG GGGCTCTGGA GGGGGAAGGC TGAGCCTTCT 1240