EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-19537

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:119093640-119094180

Target genes

Number: 12
Name	Ensembl ID

Gm12867	ENSMUSG00000086683
Ccdc23	ENSMUSG00000028643
4930538K18Rik	ENSMUSG00000028642
Gm12898	ENSMUSG00000085626
Ybx1	ENSMUSG00000028639
Ppih	ENSMUSG00000060288
Ccdc30	ENSMUSG00000028637
Ppcs	ENSMUSG00000028636
Rimkla	ENSMUSG00000048899
Gm12955	ENSMUSG00000080773
Foxj3	ENSMUSG00000032998
AA415398	ENSMUSG00000087385

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

JUN(var.2)	MA0489.1	chr4:119093902-119093916	ATGAGTCATCTCCA	-	6.52
NFE2	MA0841.1	chr4:119093901-119093912	GATGAGTCATC	-	6.14
NFE2L1	MA0089.2	chr4:119093898-119093913	TTTGATGAGTCATCT	-	6.26

Enhancer Sequence

GGAGGGCTGC AATGAAAGGG AAGATGCTGC TGCATCCAAA CAACGTCTTG TCTTTCCTTC 60
CACCTTTGTG TCTCCAGGCT CCACAGGATA AAGTTCAAGG GTCTTAAGGA ATACAAAGGT 120
TGTGTATACC AAGAGGCAAG ATGCCTCTTC AGCCTTACCA AAGCACTTTG GTTCACAGAA 180
CATTACCCAG TTGCAAACTC CAACTTGTAA CTCCACTTAG AATAACCTTC CCCACTTGAT 240
CAGGCCCTCT GTCCATCTTT TGATGAGTCA TCTCCATCAC CCTGACACCC CCGTCTCACT 300
ACCCCGGGGA TCTGACTGCA CTTTGTACAT ACCTCCACTA CAGCATTTAT CATTCTGATC 360
TGTGATTATG GCTGGTGTCC AGGCCCTCGC TAGACTGTGA GATCCTTGAG GGCAGTGTCT 420
TATTCATCTC TGTATTCCCA GTGCCTAGCT CATACAGAAG GCTGAAAGGC CATCCAGATC 480
AAGAGGAAAG TAACCCAAGA TTGGTTAGAG GGGGTCAGAT CTCTGGAAGA GAAGAGCCCA 540