EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-19478

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:116913240-116914070

Target genes

Number: 16
Name	Ensembl ID

Gm12993	ENSMUSG00000082063
Zswim5	ENSMUSG00000033948
Urod	ENSMUSG00000028684
Hectd3	ENSMUSG00000046861
1700021J08Rik	ENSMUSG00000086890
Ptch2	ENSMUSG00000028681
Gm13014	ENSMUSG00000084943
Btbd19	ENSMUSG00000073771
Plk3	ENSMUSG00000028680
Snord55	ENSMUSG00000092680
Rps8	ENSMUSG00000047675
U5	ENSMUSG00000070228
Tmem53	ENSMUSG00000048772
Gm1661	ENSMUSG00000060268
Gm12843	ENSMUSG00000085749
Rnf220	ENSMUSG00000028677

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr4:116913443-116913464	AAAAGAAAAGAGAAACAAGGA	-	6.18
Tcf12	MA0521.1	chr4:116913465-116913476	CAGCAGCTGTT	-	6.32

Enhancer Sequence

CACATACATA AAAAATAAAA ATAAATCTTG AAAGAAAGAA AGAAAATGAG GGCCTGCTGG 60
GCAGTGGTGG CTCATGGCTT TTTTAGGGAG GCAGAGGCAG ACAGATCTCT ATGAATTTGA 120
GGTCAGCCTG GTCCATGTAG TGAGTTTCAG GACAGCCAGG GCAATATAGA GAAGCCCTGT 180
CTTAAACAAA GAAGCAACAA AACAAAAGAA AAGAGAAACA AGGAGCAGCA GCTGTTTTAG 240
ATGTTTTCCA GATGGACTCA TCCTAGGCTC AGGGCTCAAG TGTGCTATTA GAGAAACTCC 300
CAGCAGAAGG TTCTATGGGA CGGTCCCTCA AAGTCCCTGG AGCTCTCCGT TCCCTTGTGC 360
TCTTCTGTCT TTTCTCTCTG CTTTTTCTTC CTGTGAGACA GGCCAGCCTA GGCTGGCCTC 420
AAACATGATC TTTTTCTCAG CTTTGAGTAC TGGGTTCATT GGCTTTGTGC CCACCACGCC 480
GAGCTTTAAC TCTTAAATGT GCCAGGAAAG CACCAGGTTT GGCATTAGCC TGGGCTCAAG 540
GCCATGAAAT CAAAGTAACA GTCCCTGCCA AGCCCGGAGC CTCTTTCTTG CCTCCGGCCA 600
CAGGCGGTCA TTTTCAGCTC CTCTGGTAGT TACTTCCACA TTTCCAAATA ACAAATGCAC 660
ATACAACTCG TTGTAACAAC TACCTTTTTA AAAAAATTTA TTTTATTTTA TTTATATGAG 720
TACACTGTAG CTGTCTTCAG AAACACCAGA TCCCTTTACA GACGGTTGTG AGCCACCATG 780
TGGTTGCTGG GATTTGAACT CAGGCCCTCT GGAAGAGCAG TCAGTGCTCT 830