EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-18983

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:59777690-59779510

Target genes

Number: 6
Name	Ensembl ID

Rod1	ENSMUSG00000028382
Hsdl2	ENSMUSG00000028383
E130308A19Rik	ENSMUSG00000045071
1110054O05Rik	ENSMUSG00000038544
Snx30	ENSMUSG00000028385
Gm12543	ENSMUSG00000080772

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr4:59778970-59778985	GAGTTCAAGGCCATA	+	6.65
RREB1	MA0073.1	chr4:59779055-59779075	GGTGGGTGGGTGGGTGGGTG	-	7.33
RREB1	MA0073.1	chr4:59779059-59779079	GGTGGGTGGGTGGGTGGGTG	-	7.33
ZNF263	MA0528.1	chr4:59778195-59778216	GTTTCCTCCTCCTCCTCTTCC	-	6.55
ZNF263	MA0528.1	chr4:59778189-59778210	CTTCCTGTTTCCTCCTCCTCC	-	6.73

Enhancer Sequence

CTGTACTAGA GATGGTCCAG CCTCAGAGGC AAGTAACTTC AGCTGAGGCC TCGGACCTGG 60
GAACAGTGCT GTTAACAGCA CGGATGAAAA CTGAAGCAGT TTTCCCTGTA TTGTGATGGA 120
AACATCCAGG GAAGAGAGTC GCTCCTGTGG ACAGCCCTAT TTGTGCCCTC TGACATGGTT 180
CCTTTAATGC AGATCTGTGG GTTAGTCAGT AGCCCTAAGA CAGATGTGCT GATGTGCGTT 240
ACATCTGTGC CAATGTTCCT TACAGGCTGG CAAGCCGTGC AAGAGGGTCA AGGGGAGCAC 300
ACCACAGAGG CGGTGCTGTA GATAAGGTGC CCTCTCTGAG AGCACAAGCC AGATGTGGGG 360
TCCGGGTGCA GGCATGAGGG CCGGGGCTGT CTGCTGTCCA CCATGCCCCT AACTGTTCCT 420
TCCAATGCCT GCAGCCTCCT CTGATCAGAA TGTTTGGGCT TCTCCCAGGT ATGTGGTCCC 480
ATTTCACTTC CCCGGAACAC TTCCTGTTTC CTCCTCCTCC TCTTCCTGTG TCTTTAGATT 540
CCTTCTTCTC CTTCGTGGCA TTCTCACTAC TGTTTTTGCT GGTAAGACAC CAGGGACAGA 600
TGTGAGCGAC ATTAAACAAG AGGCATTTCA ACAATAAACA AGATTCTTAT ATTTCTCAGG 660
GGATCCCAAA GAAATAAACA CGAGAAACAA CATTTCCTGC TGGAGTATTT ACAGTGTACT 720
CGGCTGCTAA AATGCTCAGC GTGCAATCAA AGAGGCAATT TAACATGTTT CTAACACACT 780
TAGCTGCTGT AATCATCGTG AAGAGTTTGG CCAAATTTAA AGGACCCAGT CAATTTTTAT 840
GAGAGCATTA GATTCTCTAA TGTAGCAATA ACAAATGTAC TTTTGACAGT TAATAGAGAT 900
GCTGTGTTTG TGCTTTGTTA CTGCTGTCTG TTCCTTGGCT AATAGCCCAG AATTGAAAGG 960
ATGCAATTTG ACCTCTCTCA GGCAGGGAGG CGTGATCTTG CCTTTCCTTT TGTATTGTAT 1020
GTGCAGCCCT AGGCAGACCT CGGAGAATTC AGCTCCACAT CACTTGGTTG CTCTCTTGTT 1080
TTTCTCAGTG CAACTGCCAG CCAGCATGCA GTCCCCAGGA CTCAGACTAA TGCCACTTTC 1140
CAAGGTCACT TATTGTGCTA TTTATTTGAT GCTTTTTATT TACACTGATC TCGTTTTAAC 1200
ACTTGAATTT AGTGCCATGT CTGGTGGTGC CTGCCTTTAA TCTCAGTACT TGGGAGGTGG 1260
AAGTAGGAAG ATCTCTCTGT GAGTTCAAGG CCATAAGTTC CAAGCCAGCC AGAGCTATAA 1320
AGAGGGACCC TGTCTCAGAT GGATGGATGG ATGGATGGAT GGATGGGTGG GTGGGTGGGT 1380
GGGTGGGTGG ATGTCTAAAA TTTCTATTAA AGTCAAAAGT AAATGCCTTA AACAAAAAGA 1440
AAAGTGTCCT CTATGACTAA TTTCAATTTG CCACTCAGGT CCAAATTCCA ATCCTGCTTC 1500
TTCCTCACTC TGGGATCCTA AGCAAGGTAT TTGATCTTCC TCTGCCTCAA TTTCTGTTTT 1560
TAAAAATGTA AAGATTAACT TATATGTATT GCTGGTATGT ATGTATGTAT GTATGTATTA 1620
CAAGTTCCTG GTGCTGTTGA CAGTAAGAAG AGAGCATTAG ATCCCTTAGA ACTGGAGTTA 1680
TGGACAGTTG TGATCTGCCC TGTGGGTCCT GGGTCCTCTA TAAGAGCAGC GAGTGTTTTT 1740
AACTATTGAG CCATCTCTCC AGCTCCAAAA TTCTTTTGCT CATCTTTAAA ATGAGAGTAA 1800
TATCACACAT ATCCCACACA 1820