EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-18746

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr4:41640290-41642340

Target genes

Number: 23
Name	Ensembl ID

Bag1	ENSMUSG00000028416
Ube2r2	ENSMUSG00000036241
SNORD121A	ENSMUSG00000089265
AL807823.1	ENSMUSG00000093562
Ubap2	ENSMUSG00000028433
Dcaf12	ENSMUSG00000028436
Ubap1	ENSMUSG00000028437
Nudt2	ENSMUSG00000028443
AI464131	ENSMUSG00000046312
1700066J24Rik	ENSMUSG00000036162
Gm12404	ENSMUSG00000087623
2310028H24Rik	ENSMUSG00000028439
Enho	ENSMUSG00000028445
Cntfr	ENSMUSG00000028444
Il11ra1	ENSMUSG00000073889
2810432D09Rik	ENSMUSG00000036114
Dctn3	ENSMUSG00000028447
Arid3c	ENSMUSG00000066224
Galt	ENSMUSG00000036073
Sigmar1	ENSMUSG00000036078
Ccl27a	ENSMUSG00000073888
Gm10600	ENSMUSG00000073886
Gm13302	ENSMUSG00000084010

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RXRG

MA0856.1

chr4:41640844-41640858

TGAACTTTAAACTC

6.03

Enhancer Sequence

GAGCGCTGTT GAACTTGAAC TCGAGCCCCA TTTGTAGAGT TGGGAGTCAG AGTGGGACTG 60
GCTGGCACAG AGGGCATGGC AGCCTGACAG GAACTGCAGT GTCCTGAGAG AGCCCTTGCA 120
TTCACACGGG AGTTCAGCAT TCTTCCTGCT GAGTCTGAGT TTGAATATGG GCCTCTAATC 180
TCAGTGTGGC AGGGCCCCTG AATGAATGAG TCAACCTGAG GTCTCCGGGG TCTTACAGAG 240
TCAAGAACTG GGGTACCAGT TCATGAACCT CATGGAGCTT CTGTGGGCCA GTTCTAAGTC 300
TGGGATGTGA ACCCGTGAGT GAAAGGATAC AGATATGCAA GTGTGAGCCC CCGAAGAGAG 360
CAGAGCTGAT ATTCAAGCAC CCCCCCCCAG AAGGGAAGTG TAAATCTACA TGTGAATCCC 420
ACTCCCCTGG TGTGACTCTG AATGCAAGCC CTCTGAGTGT AACCCCCCAC CCCCACCCCC 480
AGTCTCTGGA AGGAGCTTAA GTGTTCCAGT GTGAATCTGA ATGTGAATTC TAGAGCCCCA 540
GGAAGTCTTG AGTGTGAACT TTAAACTCTT AGTCTTTGGG TAGAGTCAGC GTCCCGACTG 600
GAGTATCAGT TCTGACAGAG TCTGAACCTT TAGCTCCATC TTAATCCTAG AGCCTCAGAA 660
ACCGAGAGAA AGGATTTGTG TGGGCTGTCA GAGTGAAGAC AGGGACAAAA TATGAGACTC 720
ACTGTTCTCC TCACCTCCCA GATCCAAGCT AGCTCTGCAT CTCCACGAAG AGCCAATTGG 780
GCAAGCCCCC AGGGTCAGAC ACACAAAAAT ACACCCTATG TTTCAGACCG CAGGACACAC 840
AACAGTTGAC TAACGCACAA ACACTCTGTA TTCTCAACTC TTACCACCTC AGAGGATAGG 900
GTACACAAAT ACATCCTGTG ACACAGACAA ATATATCACA GGCAGAACAA GTTGTGTTAA 960
AGACACACAG CATACAGACA CACGCCCAGT GTTGCCGGCA AGATGCTAGA CTTGCGTGCA 1020
CAAACACATA CATACATAAA TGCGGGGGTG AGGGGGATGA ATTCTCAAAC AGAGAGACTA 1080
GACAGAAAGA AAGAAAATCC TGAATTTTCA ACAAGGCGTG AAATAGTCCT GCCCGCCTGA 1140
AGCTACTGGA GGGGGGAGGG GGGCCAGGGA GCCAGAAAGC TAGACGCTGG AGAAGCTCGC 1200
AGAGGAGAGG AGTCGTGGAG AGCTGTCCGT CTGGTGACCT CCTCGCGGCC CAGCCCCCCA 1260
CGCACCGGGA GATACACTAC TCTATACAGC CTGGGGACAC CCAGAAACAC CGGAGAAGGC 1320
ACACATGGGC AGACTCACAA AAGAGACACT TGGGGATATG CCACGGGCTT GGAATCACAC 1380
ACACCAGAGG ACTTACAAAG AGACACACTG AAAGGGACTC ACTGCGTGCA GATACATCCA 1440
GGCGGACTCA TGAGAAAACC ATAGGCAGGA TCACACCGAG ACACACACAC ACACACACAC 1500
ACACACACAC ACACGCCCCA CAAGCGGATT CATACGGATA CCCAAGGCAC TGGCAGAAGC 1560
GCAGCCATCC CTTTACACTC CCGGGCACTT TGAAGTCCAG ATATTTCCCC CTCGAGAAAG 1620
AAGCAAGCTT TGGGTGCGTG GGGGGTCACT GCGAACCCCC TAGCTCTGGA ATTTTCCCAG 1680
ACCCCGCGCA TGCTGCTCAA GGGTGGGAAG AACAGGGACA CTAGGACTAA CCGCCCTGGC 1740
CACCTCCCTC CAGCCCTGAT CGCCCAGCTT CACCACCACC ACCACCACCA CCACCACCAC 1800
CACCACCACC ACCACCACCA CCACCACCAC CACGCCCAAC CCCTGGCGCG TCCGGACGTA 1860
GGGGGCTGCT GCTCGTGCGC CCCCGCCCCC GAGTTTGCGG GCAAAGTTTC TCGTGAACTT 1920
TCCTACCTCC CCCGACCGCG GGGCCCACGC GTGTCCCCTC ACTCACTCTA CCCGCACGCA 1980
CGAGGGCCGC CGGTCTGTCC GCCTTGAGCG TTCGAGGGTC AAGCCTCGCG CAGACCGCCG 2040
CGGAACACTC 2050